Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.8e-72 274.6 128 100.0
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.3e-61 238.8 127 88.2
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.8e-53 212.6 126 74.6
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-52 209.9 126 76.2
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 4.8e-51 204.5 126 73.0
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 5.0e-48 194.5 126 67.5
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.7e-46 188.7 126 67.5
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.1e-46 187.6 126 66.7
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.3e-45 185.7 126 64.3
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.0e-45 185.3 125 66.4
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.0e-45 185.3 125 68.0
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.0e-45 185.3 114 77.2
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 3.9e-45 184.9 124 65.3
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 5.1e-45 184.5 127 64.6
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-44 183.0 126 66.7
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.9e-44 182.6 126 67.5
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 5.7e-44 181.0 125 65.6
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 7.4e-44 180.6 126 65.1
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 9.7e-44 180.3 129 68.2
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-43 179.1 106 78.3
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.8e-43 177.9 127 66.9
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 1.3e-40 169.9 119 68.1
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.9e-39 166.0 126 63.5
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 8.8e-37 157.1 126 55.6
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.1e-36 156.8 123 58.5
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.4e-36 154.1 125 52.8
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.2e-35 150.6 117 60.7
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-34 150.2 81 82.7
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.1e-34 148.7 94 68.1
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.2e-32 142.5 124 51.6
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.4e-31 139.8 124 50.8
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 7.9e-30 134.0 125 49.6
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.8e-29 132.9 128 47.7
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 4.4e-28 128.3 100 57.0
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.7e-28 127.1 67 85.1
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 2.2e-27 125.9 125 44.8
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 1.8e-26 122.9 126 43.7
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-24 116.3 116 50.0
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 3.8e-24 115.2 125 44.0
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-23 113.2 79 67.1
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.9e-23 112.8 116 50.0
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 2.5e-23 112.5 125 41.6
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 3.2e-23 112.1 124 43.5
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.6e-22 109.8 127 39.4
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 3.6e-22 108.6 125 41.6
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.0e-21 107.1 127 44.1
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 1.4e-21 106.7 128 46.9
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 4.4e-20 101.7 122 39.3
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 4.4e-20 101.7 128 46.9
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 5.7e-20 101.3 125 36.8
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 2.2e-19 99.4 133 39.8
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.8e-18 96.3 128 39.1
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.6e-17 92.4 125 39.2
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 5.9e-17 91.3 118 36.4
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 7.7e-17 90.9 111 40.5
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.8e-16 88.6 125 38.4
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 2.5e-15 85.9 114 39.5
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.2e-15 84.3 114 38.6
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.1e-14 82.8 112 35.7
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.1e-14 81.3 79 51.9
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 1.8e-13 79.7 127 29.9
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.3e-13 79.3 120 33.3
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 5.2e-13 78.2 119 35.3
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 6.8e-13 77.8 118 33.1
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 1.5e-12 76.6 116 33.6
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 1.3e-11 73.6 86 43.0
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 6.3e-11 71.2 70 45.7
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 1.4e-10 70.1 60 53.3
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.5e-09 65.1 42 66.7
Haze_08779 Corylus avellana HOM05D000141 ORTHO05D001860 5.9e-09 64.7 122 34.4
QL02p074932 Quercus lobata HOM05D001713 ORTHO05D001669 2.2e-08 62.8 123 34.1
Aqoxy4G02501 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 2.9e-08 62.4 126 35.7
QL08p058986 Quercus lobata HOM05D001713 ORTHO05D001669 3.8e-08 62.0 124 32.3
COL.COLO4_10852 Corchorus olitorius HOM05D001713 ORTHO05D001669 6.5e-08 61.2 121 32.2
Haze_08778 Corylus avellana HOM05D001713 ORTHO05D001669 1.1e-07 60.5 125 32.8
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 1.5e-07 60.1 125 32.8
Aqoxy5G03281 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.5e-07 60.1 126 35.7
Aqoxy5G03283 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 4.2e-07 58.5 126 34.9
Haze_03476 Corylus avellana HOM05D001713 ORTHO05D001669 4.2e-07 58.5 117 30.8
Aqoxy2G01010 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 5.5e-07 58.2 127 34.6
THA.LOC104815134 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 5.5e-07 58.2 121 30.6
QL02p074896 Quercus lobata HOM05D001713 ORTHO05D001669 1.2e-06 57.0 123 31.7
QL02p075014 Quercus lobata HOM05D001713 ORTHO05D001669 1.2e-06 57.0 123 31.7
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.6e-06 56.6 129 31.8
THA.LOC109116201 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 1.6e-06 56.6 121 29.8
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 2.1e-06 56.2 65 43.1
Cfa010548 Carpinus fangiana HOM05D001713 ORTHO05D001669 2.1e-06 56.2 117 31.6
Aqoxy5G03280 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 2.7e-06 55.8 126 35.7
Duzib268G1296 Durio zibethinus HOM05D001713 ORTHO05D001669 4.7e-06 55.1 118 32.2
Gohir.A09G192201 Gossypium hirsutum HOM05D001713 ORTHO05D001669 4.7e-06 55.1 118 27.1
Cfa010546 Carpinus fangiana HOM05D001713 ORTHO05D001669 6.1e-06 54.7 117 29.9
CANSAT54G2127 Cannabis sativa HOM05D001713 ORTHO05D001669 8.0e-06 54.3 120 33.3


User provided reference genes

Program Settings