Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.8e-97 357.1 172 100.0
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.4e-74 281.2 171 77.2
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.8e-73 277.3 171 75.4
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 2.6e-68 262.3 171 70.2
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 9.9e-68 260.4 171 69.0
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.8e-67 258.5 171 68.4
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 3.2e-66 255.4 172 67.4
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.2e-66 255.4 171 71.3
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.1e-66 254.2 151 80.8
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.6e-65 251.5 171 66.7
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 7.8e-65 250.8 171 69.6
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.0e-64 250.4 170 65.9
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 1.0e-64 250.4 169 66.3
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.5e-63 245.7 166 71.1
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.2e-62 241.1 166 68.1
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 8.1e-62 240.7 173 67.1
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.0e-61 238.4 127 88.2
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-60 236.9 162 65.4
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.0e-60 236.1 172 65.1
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 2.6e-60 235.7 164 68.3
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.4e-60 235.0 171 64.9
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-55 220.3 126 82.5
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.6e-54 215.3 139 69.1
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 1.4e-53 213.4 171 57.9
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.9e-51 204.9 159 61.0
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-49 200.3 112 84.8
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.9e-47 193.0 161 52.2
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 6.9e-45 184.5 160 52.5
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.4e-44 182.2 160 51.9
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.7e-43 179.9 167 50.3
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.9e-43 178.3 114 74.6
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.9e-42 176.4 161 51.6
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.3e-42 174.1 130 65.4
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 2.3e-40 169.5 161 46.0
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 8.7e-40 167.5 137 56.9
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 5.3e-37 158.3 160 49.4
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.5e-34 149.4 117 59.8
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 4.2e-34 148.7 161 44.1
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 6.0e-33 144.8 169 44.4
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.0e-32 144.1 166 41.0
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 6.7e-32 141.4 150 44.0
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 5.7e-31 138.3 164 42.1
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 1.8e-29 133.3 149 49.7
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 9.0e-29 131.0 165 40.6
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 1.5e-28 130.2 155 37.4
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 2.6e-28 129.4 168 36.3
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 5.9e-28 128.3 148 48.6
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.9e-26 123.2 144 47.9
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 5.5e-26 121.7 146 47.3
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 1.0e-24 117.5 130 42.3
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 1.3e-22 110.5 209 34.4
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 1.7e-22 110.2 135 40.0
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-22 109.8 70 72.9
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 2.2e-22 109.8 168 38.7
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.8e-22 108.6 132 45.5
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.1e-21 107.5 163 41.7
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.8e-21 106.7 132 44.7
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 2.0e-20 103.2 163 33.1
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-19 100.5 188 34.0
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 6.7e-16 88.2 155 35.5
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-15 87.4 79 54.4
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.8e-13 80.1 115 33.9
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 4.1e-13 79.0 113 33.6
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 1.2e-12 77.4 158 33.5
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.4e-12 75.9 113 34.5
Aqoxy2G01010 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.0e-11 74.3 166 33.7
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.0e-11 74.3 119 31.9
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 2.2e-11 73.2 86 41.9
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 5.0e-11 72.0 70 42.9
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 6.5e-11 71.6 64 50.0
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 8.5e-11 71.2 132 31.8
Aqoxy4G02501 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.1e-10 70.9 164 34.1
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.1e-10 70.9 169 32.0
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.9e-10 70.1 84 38.1
CSS0035206 Camellia sinensis var. sinensis HOM05D001713 ORTHO05D001669 2.5e-10 69.7 172 30.8
Haze_08779 Corylus avellana HOM05D000141 ORTHO05D001860 1.2e-09 67.4 153 30.7
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 4.7e-09 65.5 125 33.6
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.8e-08 63.5 42 66.7
QL08p058986 Quercus lobata HOM05D001713 ORTHO05D001669 3.0e-08 62.8 161 29.2
PGSC0003DMG400007039 Solanum tuberosum HOM05D018142 ORTHO05D010544 1.1e-07 60.8 66 53.0
PSO210G6916 Papaver somniferum HOM05D001713 ORTHO05D001669 1.5e-07 60.5 163 27.0
Aqoxy2G00996 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 2.0e-07 60.1 128 34.4
FvH4_3g37630 Fragaria vesca HOM05D001713 ORTHO05D001669 2.0e-07 60.1 159 32.1
Aqoxy5G03281 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 3.3e-07 59.3 160 32.5
Haze_08778 Corylus avellana HOM05D001713 ORTHO05D001669 4.4e-07 58.9 118 32.2
Aqoxy5G03283 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 5.7e-07 58.5 160 31.9
THA.LOC104815134 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 5.7e-07 58.5 121 28.9
THA.LOC109116201 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 9.7e-07 57.8 121 28.1
QL02p074932 Quercus lobata HOM05D001713 ORTHO05D001669 1.3e-06 57.4 116 30.2
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 1.7e-06 57.0 137 27.0
Aqoxy5G03280 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 3.7e-06 55.8 160 32.5


User provided reference genes

Program Settings