Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 9.9e-86 320.1 163 100.0
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 1.6e-83 312.8 163 98.2
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 3.7e-64 248.4 163 79.1
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 3.1e-63 245.4 163 81.0
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 8.5e-61 237.3 125 91.2
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 5.5e-60 234.6 163 77.3
Peaxi162Scf00003g01820 Petunia axillaris HOM05D007350 ORTHO05D009323 7.7e-30 134.4 98 68.4
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 1.2e-27 127.1 171 49.1
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 3.2e-23 112.5 153 45.1
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 5.4e-23 111.7 150 45.3
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 9.2e-23 110.9 141 46.8
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 1.2e-22 110.5 136 49.3
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 4.5e-22 108.6 142 47.9
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 4.5e-22 108.6 158 40.5
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 4.5e-22 108.6 100 61.0
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 5.9e-22 108.2 95 62.1
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 5.9e-22 108.2 164 44.5
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 1.7e-21 106.7 95 63.2
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 1.7e-21 106.7 91 61.5
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 2.3e-21 106.3 100 54.0
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 2.3e-21 106.3 149 45.0
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 2.9e-21 105.9 140 45.7
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 3.9e-21 105.5 109 54.1
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 8.6e-21 104.4 164 42.1
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.1e-20 104.0 143 42.7
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 1.9e-20 103.2 138 47.8
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 1.9e-20 103.2 120 51.7
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 2.5e-20 102.8 142 46.5
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 2.5e-20 102.8 115 53.0
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 3.3e-20 102.4 138 47.8
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 4.3e-20 102.1 80 61.2
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 4.3e-20 102.1 153 40.5
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 4.3e-20 102.1 108 50.9
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 5.6e-20 101.7 150 43.3
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 5.6e-20 101.7 150 43.3
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 9.5e-20 100.9 96 55.2
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 1.2e-19 100.5 92 62.0
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 1.6e-19 100.1 117 51.3
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 2.1e-19 99.8 117 50.4
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 2.8e-19 99.4 166 39.8
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 2.8e-19 99.4 143 42.7
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 3.6e-19 99.0 93 54.8
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 3.6e-19 99.0 119 47.9
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 3.6e-19 99.0 131 45.0
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 3.6e-19 99.0 131 45.0
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 4.7e-19 98.6 80 58.8
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 4.7e-19 98.6 150 42.7
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 8.0e-19 97.8 117 49.6
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.0e-18 97.4 128 46.1
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 1.4e-18 97.1 76 65.8
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 1.4e-18 97.1 114 49.1
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 1.8e-18 96.7 136 44.1
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 1.8e-18 96.7 79 59.5
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 5.2e-18 95.1 151 37.7
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 5.2e-18 95.1 148 43.2
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 1.2e-17 94.0 132 44.7
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 1.2e-17 94.0 92 53.3
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 1.2e-17 94.0 91 59.3
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 1.5e-17 93.6 90 55.6
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 2.0e-17 93.2 115 47.8
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 2.6e-17 92.8 89 58.4
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 3.4e-17 92.4 78 57.7
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 3.4e-17 92.4 77 62.3
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 4.4e-17 92.0 78 57.7
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 4.4e-17 92.0 88 53.4
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 4.4e-17 92.0 144 40.3
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 5.8e-17 91.7 87 59.8
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 9.8e-17 90.9 89 56.2
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 9.8e-17 90.9 124 45.2
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 9.8e-17 90.9 63 77.8
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 1.3e-16 90.5 87 52.9
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 1.3e-16 90.5 103 47.6
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 1.7e-16 90.1 151 42.4
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 1.7e-16 90.1 78 56.4
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.2e-16 89.7 78 56.4
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 2.9e-16 89.4 98 52.0
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 2.9e-16 89.4 111 45.0
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 4.9e-16 88.6 98 51.0
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 6.4e-16 88.2 98 50.0
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 8.3e-16 87.8 142 38.7
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 1.1e-15 87.4 87 51.7
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 1.4e-15 87.0 76 57.9
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 1.9e-15 86.7 84 52.4
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 2.4e-15 86.3 87 57.5
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 2.4e-15 86.3 76 57.9
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 4.1e-15 85.5 77 55.8
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 5.4e-15 85.1 80 53.8
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 7.0e-15 84.7 142 37.3
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 9.2e-15 84.3 122 36.9
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 9.2e-15 84.3 89 51.7
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 1.6e-14 83.6 83 53.0
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 2.0e-14 83.2 66 63.6
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 6.0e-14 81.6 73 50.7
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 6.2e-11 71.6 51 76.5
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 5.2e-10 68.6 107 38.3
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 4.4e-09 65.5 73 49.3
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 1.3e-08 63.9 98 43.9
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 2.2e-08 63.2 76 44.7
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 1.1e-07 60.8 102 39.2
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 7.1e-07 58.2 92 35.9
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 7.1e-07 58.2 58 50.0
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 7.8e-06 54.7 62 46.8


User provided reference genes

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