Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 0.0e+00 1652.1 798 100.0
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 0.0e+00 1184.1 599 95.8
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.4e-179 632.9 473 69.6
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.7e-176 623.2 457 70.7
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 6.5e-138 495.7 465 57.0
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.6e-110 404.1 299 68.6
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 5.9e-91 339.7 311 56.9
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.0e-38 165.2 266 39.5
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.9e-37 160.6 323 35.0
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.2e-32 143.3 152 53.3
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 5.3e-31 140.6 151 52.3
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.4e-30 137.9 150 52.0
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.2e-29 135.2 151 50.3
PGSC0003DMG400007039 Solanum tuberosum HOM05D018142 ORTHO05D010544 1.1e-28 132.9 112 63.4
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.4e-28 132.5 149 49.7
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.2e-28 131.0 151 48.3
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 5.5e-28 130.6 175 45.1
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 9.3e-28 129.8 174 44.8
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.6e-27 129.0 151 48.3
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 3.5e-27 127.9 164 48.8
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 1.0e-26 126.3 174 45.4
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 1.3e-26 125.9 152 48.0
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.7e-25 119.8 150 47.3
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.6e-24 119.0 152 48.0
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 1.6e-24 119.0 150 47.3
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 6.3e-24 117.1 148 41.9
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.3e-24 117.1 152 44.7
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 3.1e-23 114.8 147 46.3
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 4.1e-23 114.4 152 43.4
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.1e-23 114.4 131 47.3
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-22 112.5 151 38.4
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 5.9e-22 110.5 150 40.0
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.2e-21 108.6 145 41.4
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 8.5e-21 106.7 150 38.0
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.1e-20 106.3 128 46.9
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-20 106.3 117 53.0
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 1.6e-19 102.4 126 46.0
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 4.6e-19 100.9 152 38.8
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.9e-19 100.1 151 39.7
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 2.3e-18 98.6 150 36.0
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.8e-18 96.7 115 46.1
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 1.5e-17 95.9 149 37.6
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-16 92.8 160 37.5
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 1.1e-15 89.7 150 33.3
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 3.1e-15 88.2 185 34.6
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 5.3e-15 87.4 147 35.4
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.1e-15 86.7 114 44.7
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.9e-13 81.6 87 48.3
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.9e-13 81.6 118 40.7
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 6.5e-13 80.5 136 32.4
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.5e-13 80.1 88 48.9
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 1.1e-12 79.7 158 31.0
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 3.2e-12 78.2 137 31.4
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 4.2e-12 77.8 133 35.3
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 5.5e-12 77.4 157 30.6
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 2.7e-11 75.1 147 29.3
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 2.7e-11 75.1 118 32.2
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.1e-11 73.9 74 54.1
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 8.8e-10 70.1 114 36.0
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 1.1e-09 69.7 124 28.2
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 6.3e-08 63.9 168 28.0
FvH4_3g33791 Fragaria vesca HOM05D001713 ORTHO05D001669 2.4e-07 62.0 155 27.1
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 3.1e-07 61.6 115 31.3
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.1e-07 61.2 116 30.2
TAR374G1627 Trochodendron aralioides HOM05D001713 ORTHO05D001669 4.1e-07 61.2 170 24.1
FAN11G3424 Fragaria x ananassa HOM05D001713 ORTHO05D001669 7.0e-07 60.5 125 30.4
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 1.5e-06 59.3 111 30.6
FAN16G0125 Fragaria x ananassa HOM05D001713 ORTHO05D001669 2.0e-06 58.9 155 26.5
Prupe.5G092200 Prunus persica HOM05D001713 ORTHO05D001669 2.0e-06 58.9 155 29.7
QL12p032723 Quercus lobata HOM05D001713 ORTHO05D001669 2.6e-06 58.5 164 27.4
TAR374G0219 Trochodendron aralioides HOM05D001713 ORTHO05D001669 2.6e-06 58.5 152 25.0
QL08p058986 Quercus lobata HOM05D001713 ORTHO05D001669 3.5e-06 58.2 147 27.9
TAR374G1468 Trochodendron aralioides HOM05D001713 ORTHO05D001669 5.9e-06 57.4 152 24.3


User provided reference genes

Program Settings