Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.2e-108 396.4 186 100.0
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-92 342.4 188 87.8
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 5.3e-91 337.8 166 92.2
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-85 320.1 168 88.1
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.5e-66 255.0 167 72.5
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-63 246.9 167 69.5
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 2.3e-62 242.7 168 65.5
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-61 240.4 168 64.3
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.5e-61 240.0 166 68.1
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.4e-61 237.7 131 83.2
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-59 233.8 168 62.5
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.4e-59 232.6 166 64.5
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 6.9e-59 231.1 166 61.4
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.5e-58 229.9 168 60.7
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 3.4e-58 228.8 164 63.4
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.7e-58 227.6 168 61.3
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-56 223.8 169 61.5
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.2e-56 222.2 147 71.4
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 1.4e-54 216.9 158 64.6
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 3.0e-54 215.7 166 61.4
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.0e-54 215.7 164 59.8
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 6.7e-54 214.5 159 61.6
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.3e-53 212.2 169 60.4
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.7e-53 210.7 118 80.5
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 5.0e-49 198.4 163 55.2
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 6.5e-49 198.0 163 55.2
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 7.2e-48 194.5 163 54.0
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.6e-47 192.2 117 75.2
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.6e-47 192.2 163 50.3
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.1e-47 191.4 135 63.7
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-45 187.2 163 53.4
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 2.2e-44 183.0 169 50.3
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.1e-43 178.7 125 65.6
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.8e-41 172.2 108 75.9
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 6.5e-41 171.4 161 46.6
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 8.8e-38 161.0 137 55.5
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 9.7e-37 157.5 166 44.0
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 2.4e-35 152.9 167 44.3
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 3.1e-35 152.5 169 45.6
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 5.9e-34 148.3 162 45.1
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 1.3e-33 147.1 154 43.5
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-33 146.4 113 61.1
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 3.8e-33 145.6 173 39.9
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 4.7e-31 138.7 166 42.2
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 5.2e-30 135.2 151 50.3
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.5e-29 133.7 148 48.6
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 7.5e-29 131.3 151 50.3
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 2.8e-28 129.4 135 45.9
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 1.1e-27 127.5 158 38.6
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-27 126.7 145 48.3
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 4.5e-26 122.1 168 40.5
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.2e-23 114.0 166 40.4
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 3.6e-23 112.5 139 36.7
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 4.7e-23 112.1 144 46.5
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.0e-22 110.9 143 44.1
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 2.0e-21 106.7 162 34.6
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 2.2e-20 103.2 197 34.0
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.1e-19 100.9 79 60.8
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.1e-19 99.0 186 34.9
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 1.3e-17 94.0 155 36.8
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.7e-17 93.6 122 38.5
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.6e-17 91.7 111 37.8
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 4.3e-16 89.0 70 54.3
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 2.1e-15 86.7 118 37.3
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 6.1e-15 85.1 93 40.9
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 8.9e-14 81.3 70 54.3
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.9e-14 81.3 97 43.3
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 3.4e-13 79.3 120 34.2
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 1.7e-12 77.0 113 34.5
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 6.4e-12 75.1 157 31.8
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 5.4e-11 72.0 172 30.8
PGSC0003DMG400007042 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.6e-10 68.9 71 52.1
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 7.8e-10 68.2 41 65.9
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 3.9e-09 65.9 67 47.8
CSS0035206 Camellia sinensis var. sinensis HOM05D001713 ORTHO05D001669 5.0e-09 65.5 173 29.5
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.1e-08 64.3 90 32.2
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 9.5e-08 61.2 74 37.8
Solyc10g051210.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.1e-07 60.1 117 28.2
Aqoxy2G01010 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 4.7e-07 58.9 166 29.5
Hma1.2p1_2547F.1_g324190 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 1.1e-06 57.8 121 31.4
Hma1.2p1_2547F.1_g324191 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 1.1e-06 57.8 121 31.4
Hma1.2p1_2547F.1_g324193 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 1.1e-06 57.8 121 31.4
TWI34G0085 Tripterygium wilfordii HOM05D001713 ORTHO05D001669 5.2e-06 55.5 182 25.8


User provided reference genes

Program Settings