Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g045957.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 2.0e-73 278.9 128 100.0
Solyc11g150101.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 5.6e-68 260.8 126 93.7
Sopen01g017090 Solanum pennellii HOM05D000030 ORTHO05D000009 9.7e-36 153.7 83 86.7
Sopen01g026300 Solanum pennellii HOM05D000030 ORTHO05D000009 9.7e-36 153.7 83 86.7
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 9.7e-36 153.7 83 86.7
Sopen11g012600 Solanum pennellii HOM05D000030 ORTHO05D000009 1.1e-34 150.2 83 84.3
Solyc11g150144.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 9.1e-34 147.1 71 94.4
Solyc12g021265.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 2.2e-32 142.5 67 95.5
Sopen12g008930 Solanum pennellii HOM05D000030 ORTHO05D000009 7.4e-28 127.5 59 96.6
Solyc07g049405.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 1.3e-27 126.7 60 95.0
Solyc11g150102.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 1.3e-27 126.7 60 95.0
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 1.3e-27 126.7 60 95.0
Solyc11g150103.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 4.8e-27 124.8 57 96.5
Solyc09g063157.2 Solanum lycopersicum HOM05D000030 ORTHO05D000009 1.8e-26 122.9 60 93.3
Solyc01g058593.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 5.3e-26 121.3 57 94.7
Sopen03g009380 Solanum pennellii HOM05D000030 ORTHO05D000009 2.0e-25 119.4 58 91.4
Solyc12g150108.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 4.2e-23 111.7 60 85.0
Sopen03g009880 Solanum pennellii HOM05D009060 ORTHO05D011398 2.7e-22 109.0 67 76.1
Solyc01g066297.1 Solanum lycopersicum HOM05D009060 ORTHO05D000009 1.4e-18 96.7 45 97.8
Sopen12g015190 Solanum pennellii HOM05D000030 ORTHO05D000031 4.2e-15 85.1 44 86.4
PGSC0003DMG400016410 Solanum tuberosum HOM05D000030 ORTHO05D000009 5.5e-15 84.7 60 58.3
Sopen10g022460 Solanum pennellii HOM05D000030 ORTHO05D000009 1.0e-13 80.5 58 58.6
Sopen08g019750 Solanum pennellii HOM05D000030 ORTHO05D000009 3.4e-12 75.5 42 73.8
SHI18704 Sapria himalayana HOM05D000030 ORTHO05D000009 8.3e-11 70.9 61 54.1
SHI48106 Sapria himalayana HOM05D000030 ORTHO05D000009 8.3e-11 70.9 61 54.1
SHI03486 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-10 69.3 61 54.1
SHI06862 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-10 69.3 61 54.1
SHI13135 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-10 69.3 61 54.1
SHI14423 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-10 69.3 61 54.1
SHI24403 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-10 69.3 61 54.1
SHI33171 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-10 69.3 61 54.1
SHI34247 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-10 69.3 61 54.1
SHI44639 Sapria himalayana HOM05D000030 ORTHO05D000009 2.4e-10 69.3 61 54.1
Nitab4.5_0006479g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.1e-10 68.9 60 50.0
SHI11445 Sapria himalayana HOM05D002254 ORTHO05D005423 3.1e-10 68.9 61 54.1
SHI27009 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-10 68.9 61 54.1
SHI33921 Sapria himalayana HOM05D000030 ORTHO05D000009 3.1e-10 68.9 61 54.1
SHI16054 Sapria himalayana HOM05D000030 ORTHO05D000009 4.1e-10 68.6 61 54.1
SHI25723 Sapria himalayana HOM05D000030 ORTHO05D000009 5.4e-10 68.2 61 54.1
SHI45746 Sapria himalayana HOM05D000030 ORTHO05D000009 5.4e-10 68.2 62 51.6
SHI22822 Sapria himalayana HOM05D000030 ORTHO05D000009 7.0e-10 67.8 61 52.5
SHI33817 Sapria himalayana HOM05D000030 ORTHO05D000009 9.1e-10 67.4 61 52.5
Nitab4.5_0000376g0060 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.2e-09 67.0 60 45.0
Nitab4.5_0006088g0060 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.5e-09 65.5 65 47.7
SHI17636 Sapria himalayana HOM05D000030 ORTHO05D000009 7.7e-09 64.3 61 52.5
Nitab4.5_0001334g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.3e-08 63.5 60 46.7
SHI17268 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-08 63.5 59 54.2
SHI31748 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-08 63.5 59 54.2
TWI53G0809 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.2e-08 62.8 91 44.0
TWI53G1182 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.2e-08 62.8 91 44.0
TWI81G0317 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 2.2e-08 62.8 91 44.0
Manes.16G057109 Manihot esculenta HOM05D000030 ORTHO05D000009 2.9e-08 62.4 102 37.3
Nitab4.5_0000072g0380 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.8e-08 62.0 60 45.0
SHI15401 Sapria himalayana HOM05D000030 ORTHO05D000009 3.8e-08 62.0 61 50.8
Sopen07g007410 Solanum pennellii HOM05D000030 ORTHO05D000009 3.8e-08 62.0 47 53.2
Nitab4.5_0002792g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 6.5e-08 61.2 84 36.9
SHI03707 Sapria himalayana HOM05D000030 ORTHO05D000009 6.5e-08 61.2 59 52.5
EL10Ac6g14430 Beta vulgaris HOM05D000030 ORTHO05D000009 1.5e-07 60.1 66 47.0
Gorai.005G011200 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.5e-07 60.1 59 47.5
Rhsim07G0172000 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.5e-07 60.1 54 55.6
Gorai.002G232100 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.2e-07 58.9 56 50.0
Gorai.005G104500 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.2e-07 58.9 56 50.0
SGA_v2.0_scaffold26G11240 Striga asiatica HOM05D000030 ORTHO05D000009 3.2e-07 58.9 52 51.9
Manes.03G090444 Manihot esculenta HOM05D000030 ORTHO05D000009 4.2e-07 58.5 65 44.6
Manes.13G073701 Manihot esculenta HOM05D000030 ORTHO05D000009 4.2e-07 58.5 61 47.5
Manes.13G077247 Manihot esculenta HOM05D000030 ORTHO05D000009 4.2e-07 58.5 65 44.6
SHI29027 Sapria himalayana HOM05D000030 ORTHO05D000009 4.2e-07 58.5 59 52.5
SHI34241 Sapria himalayana HOM05D000030 ORTHO05D000009 4.2e-07 58.5 54 53.7
Gorai.004G207100 Gossypium raimondii HOM05D000030 ORTHO05D000009 5.5e-07 58.2 56 48.2
Manes.13G119650 Manihot esculenta HOM05D000030 ORTHO05D000009 5.5e-07 58.2 62 48.4
QL09p001102 Quercus lobata HOM05D000030 ORTHO05D003511 5.5e-07 58.2 59 49.2
Hund07486 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.5e-07 58.2 64 42.2
Hund22274 Selenicereus undatus HOM05D000030 ORTHO05D000009 5.5e-07 58.2 64 42.2
SGA_v2.0_scaffold370G50130 Striga asiatica HOM05D000030 ORTHO05D000009 5.5e-07 58.2 53 47.2
Solyc03g058420.3 Solanum lycopersicum HOM05D009060 ORTHO05D011398 7.2e-07 57.8 31 77.4
Manes.17G029905 Manihot esculenta HOM05D000030 ORTHO05D000009 9.4e-07 57.4 64 45.3
Rhsim08G0120500 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.4e-07 57.4 53 49.1
SHI06478 Sapria himalayana HOM05D000035 ORTHO05D000009 9.4e-07 57.4 101 31.7
SHI37118 Sapria himalayana HOM05D000035 ORTHO05D000009 9.4e-07 57.4 95 34.7
ECA238G4544 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.2e-06 57.0 63 42.9
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 1.2e-06 57.0 65 44.6
SGA_v2.0_scaffold86G26854 Striga asiatica HOM05D000030 ORTHO05D000009 1.2e-06 57.0 52 50.0
Gorai.012G102500 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.6e-06 56.6 56 50.0
Manes.02G205650 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-06 56.6 61 45.9
SHI51734 Sapria himalayana HOM05D000030 ORTHO05D000009 1.6e-06 56.6 55 49.1
Manes.02G168901 Manihot esculenta HOM05D000030 ORTHO05D000009 2.1e-06 56.2 61 45.9
Manes.06G026760 Manihot esculenta HOM05D000030 ORTHO05D000009 2.1e-06 56.2 61 45.9
Nitab4.5_0004872g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.1e-06 56.2 54 40.7
Rhsim04G0076600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-06 56.2 54 51.9
Rhsim10G0136600 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-06 56.2 53 49.1
CSS0000551 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.7e-06 55.8 59 49.2
Manes.02G223133 Manihot esculenta HOM05D000030 ORTHO05D000009 2.7e-06 55.8 61 47.5
Manes.12G071950 Manihot esculenta HOM05D000030 ORTHO05D000009 2.7e-06 55.8 61 47.5
Rhsim08G0113700 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.7e-06 55.8 53 49.1
Rhsim10G0136400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.7e-06 55.8 53 49.1
SHI38959 Sapria himalayana HOM05D000035 ORTHO05D000009 2.7e-06 55.8 121 29.8
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 3.6e-06 55.5 64 43.8
Manes.16G014950 Manihot esculenta HOM05D000030 ORTHO05D000009 3.6e-06 55.5 64 43.8
Manes.17G003183 Manihot esculenta HOM05D000030 ORTHO05D000009 3.6e-06 55.5 65 43.1
Rhsim02G0186500 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.6e-06 55.5 53 49.1
SHI45384 Sapria himalayana HOM05D000035 ORTHO05D000009 3.6e-06 55.5 86 33.7
Hma1.2p1_0536F.1_g174140 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-06 55.1 59 42.4
Hma1.2p1_0705F.1_g206900 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-06 55.1 91 34.1
Manes.01G057350 Manihot esculenta HOM05D000030 ORTHO05D000009 4.7e-06 55.1 60 46.7
SHI36107 Sapria himalayana HOM05D000035 ORTHO05D000009 4.7e-06 55.1 115 31.3
SHI46285 Sapria himalayana HOM05D000035 ORTHO05D000009 4.7e-06 55.1 124 33.1
Hund04417 Selenicereus undatus HOM05D000030 ORTHO05D000009 4.7e-06 55.1 64 39.1
Sopen12g025130 Solanum pennellii HOM05D000030 ORTHO05D000031 4.7e-06 55.1 53 50.9
AUR62008835 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.1e-06 54.7 72 43.1
ECA248G1370 Erigeron canadensis HOM05D007690 ORTHO05D009685 6.1e-06 54.7 57 47.4
Gorai.005G140200 Gossypium raimondii HOM05D000030 ORTHO05D000009 6.1e-06 54.7 31 74.2
Gorai.011G212800 Gossypium raimondii HOM05D000030 ORTHO05D000009 6.1e-06 54.7 42 57.1
Hma1.2p1_0180F.1_g079730 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.1e-06 54.7 59 42.4
Hma1.2p1_0336F.1_g129040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.1e-06 54.7 59 42.4
Hma1.2p1_2511F.1_g323600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.0e-06 54.3 57 49.1
Manes.02G223166 Manihot esculenta HOM05D000030 ORTHO05D000009 8.0e-06 54.3 61 45.9
SHI37723 Sapria himalayana HOM05D000035 ORTHO05D000009 8.0e-06 54.3 127 27.6
SHI41410 Sapria himalayana HOM05D000035 ORTHO05D000009 8.0e-06 54.3 101 32.7


User provided reference genes

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