Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g045890.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 1.0e-134 483.4 240 100.0
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 1.6e-68 263.5 177 75.1
Sopen05g027060 Solanum pennellii HOM05D000213 ORTHO05D011567 1.6e-63 246.9 182 73.1
Sopen05g027030 Solanum pennellii HOM05D000213 ORTHO05D011567 1.7e-54 216.9 165 69.1
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.9e-37 160.2 258 38.0
Nitab4.5_0005140g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009625 3.3e-29 132.9 151 48.3
Sopen09g019800 Solanum pennellii HOM05D000017 ORTHO05D004172 4.3e-29 132.5 80 82.5
Potri.007G061821 Populus trichocarpa HOM05D004909 ORTHO05D009316 1.1e-19 101.3 169 38.5
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 4.1e-19 99.4 196 35.2
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 3.4e-18 96.3 234 33.3
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 5.9e-18 95.5 319 25.1
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 2.9e-17 93.2 242 32.2
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 4.2e-16 89.4 205 31.2
Solyc09g018210.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 8.2e-12 75.1 48 72.9
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 9.1e-11 71.6 251 27.1
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 9.1e-11 71.6 251 27.1
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 2.9e-09 66.6 201 27.9
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 5.5e-08 62.4 203 27.6
Solyc01g099035.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 9.4e-08 61.6 37 83.8
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 3.6e-07 59.7 203 29.1
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.0e-06 58.2 65 46.2


User provided reference genes

Program Settings