Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g045675.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 7.7e-115 417.2 210 100.0
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 7.3e-65 251.1 400 43.8
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-55 218.4 209 59.3
Solyc05g150114.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 2.6e-54 216.1 148 77.0
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 2.4e-47 193.0 209 55.5
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 2.2e-45 186.4 210 54.8
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 7.9e-43 177.9 209 49.3
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 1.8e-42 176.8 252 45.6
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 3.1e-31 139.4 99 74.7
Sopen10g027690 Solanum pennellii HOM05D000047 ORTHO05D000044 3.4e-30 136.0 85 78.8
Sopen03g009310 Solanum pennellii HOM05D000047 ORTHO05D000044 6.5e-29 131.7 89 73.0
Sopen04g012220 Solanum pennellii HOM05D000047 ORTHO05D000589 6.5e-29 131.7 83 77.1
Sopen04g023920 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-28 130.2 85 76.5
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 3.2e-28 129.4 209 39.7
Sopen04g011260 Solanum pennellii HOM05D000047 ORTHO05D023162 9.3e-28 127.9 85 72.9
Sopen10g007040 Solanum pennellii HOM05D000047 ORTHO05D000589 9.3e-28 127.9 89 71.9
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 7.9e-27 124.8 252 39.7
Solyc01g015035.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 1.8e-26 123.6 199 43.7
PGSC0003DMG400017015 Solanum tuberosum HOM05D000047 ORTHO05D023162 8.7e-26 121.3 83 71.1
Sopen01g010900 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-25 120.9 85 70.6
PGSC0003DMG400017016 Solanum tuberosum HOM05D004926 ORTHO05D013907 5.7e-25 118.6 220 37.7
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 1.6e-24 117.1 115 62.6
PGSC0003DMG400040719 Solanum tuberosum HOM05D004926 ORTHO05D013907 3.1e-23 112.8 78 75.6
Sopen11g022440 Solanum pennellii HOM05D000047 ORTHO05D000589 4.1e-23 112.5 83 68.7
Solyc12g015923.1 Solanum lycopersicum HOM05D004926 ORTHO05D013907 4.5e-22 109.0 117 58.1
Sopen01g029340 Solanum pennellii HOM05D000047 ORTHO05D000589 8.8e-18 94.7 66 72.7
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-15 87.0 55 78.2
Sopen03g008650 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-13 79.7 83 53.0
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-12 77.8 63 52.4
Sopen12g014880 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-12 77.8 96 53.1
Nitab4.5_0001574g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-12 77.4 63 52.4
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-12 77.4 63 50.8
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.2e-12 76.3 63 50.8
Nitab4.5_0025657g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.2e-12 75.9 66 48.5
Nitab4.5_0000248g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.5e-12 75.5 67 49.3
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.4e-12 74.7 63 50.8
Nitab4.5_0000524g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-11 73.9 66 47.0
Nitab4.5_0000046g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-11 73.2 63 49.2
Nitab4.5_0001228g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-11 73.2 63 49.2
Nitab4.5_0020898g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.7e-11 73.2 63 47.6
Nitab4.5_0006856g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-11 72.8 67 47.8
Nitab4.5_0002045g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.7e-11 72.4 63 50.8
Nitab4.5_0000276g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.9e-11 71.6 64 45.3
Nitab4.5_0001124g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.9e-11 71.6 92 39.1
Nitab4.5_0013472g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.9e-11 71.6 57 52.6
Nitab4.5_0001843g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-10 70.5 60 46.7
Nitab4.5_0001843g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-10 70.5 59 47.5
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-10 70.5 66 45.5
Nitab4.5_0010681g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-10 70.5 65 46.2
Sopen12g009350 Solanum pennellii HOM05D004926 ORTHO05D013907 1.8e-10 70.5 72 59.7
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.3e-10 70.1 66 45.5
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-10 69.7 58 48.3
Nitab4.5_0002314g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-10 69.7 67 46.3
Nitab4.5_0002470g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-10 69.7 58 50.0
Nitab4.5_0002664g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-10 69.7 63 47.6
Nitab4.5_0005662g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.0e-10 69.7 58 50.0
Nitab4.5_0000324g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.1e-10 68.9 71 45.1
Nitab4.5_0003972g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.7e-10 68.6 59 49.2
Nitab4.5_0026708g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.7e-10 68.6 67 44.8
Nitab4.5_0001299g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.8e-10 68.2 63 46.0
Nitab4.5_0001634g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.8e-10 68.2 139 33.1
Nitab4.5_0016905g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.8e-10 68.2 63 46.0
Nitab4.5_0004541g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-09 67.8 63 44.4
Nitab4.5_0005729g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-09 67.8 115 34.8
Nitab4.5_0000068g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-09 67.4 63 46.0
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-09 67.4 59 45.8
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-09 67.4 59 45.8
Nitab4.5_0005138g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-09 67.4 58 48.3
Nitab4.5_0000276g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-09 67.0 67 44.8
Nitab4.5_0000599g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-09 67.0 63 46.0
Nitab4.5_0003000g0090 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-09 67.0 115 35.7
Nitab4.5_0003692g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-09 67.0 93 39.8
Nitab4.5_0007680g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-09 67.0 66 45.5
Sopen04g011010 Solanum pennellii HOM05D000047 ORTHO05D023162 2.0e-09 67.0 53 60.4
PGSC0003DMG400021467 Solanum tuberosum HOM05D004926 ORTHO05D013907 2.0e-09 67.0 112 40.2
Nitab4.5_0000902g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-09 66.6 57 45.6
Nitab4.5_0002540g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-09 66.6 124 33.1
Nitab4.5_0011481g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-09 66.6 137 28.5
Nitab4.5_0000754g0320 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-09 66.2 90 35.6
Nitab4.5_0001685g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-09 66.2 61 49.2
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.3e-09 66.2 110 32.7
Sopen04g011040 Solanum pennellii HOM05D000047 ORTHO05D000589 5.7e-09 65.5 47 66.0
Nitab4.5_0013196g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.4e-09 65.1 63 47.6
Nitab4.5_0002542g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.3e-08 64.3 63 46.0
Nitab4.5_0000326g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-08 63.9 63 42.9
Nitab4.5_0000396g0210 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-08 63.9 58 44.8
Sopen11g012550 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-08 63.9 44 72.7
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.7e-08 62.8 124 32.3
Nitab4.5_0001392g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.8e-08 62.4 200 26.0
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.3e-08 62.0 57 42.1
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.3e-08 62.0 63 41.3
Nitab4.5_0000035g0160 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.2e-08 61.6 63 41.3
Nitab4.5_0000271g0140 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.2e-08 61.6 59 44.1
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-07 61.2 58 46.6
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.8e-07 60.5 56 48.2
Nitab4.5_0000593g0250 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.4e-07 60.1 95 34.7
Nitab4.5_0022418g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-07 58.9 124 33.1
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.0e-07 58.5 63 44.4
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.2e-06 57.8 63 41.3
Nitab4.5_0002740g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-06 57.4 115 33.9
Nitab4.5_0011685g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-06 57.4 52 44.2
Sopen05g027320 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-06 57.4 79 45.6
Nitab4.5_0004364g0070 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.0e-06 57.0 63 42.9
Nitab4.5_0005446g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-06 56.6 115 32.2


User provided reference genes

Program Settings