Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g044470.3 Solanum lycopersicum HOM05D017728 ORTHO05D020821 4.1e-90 334.7 172 100.0
Sopen05g026800 Solanum pennellii HOM05D017728 ORTHO05D020821 1.6e-81 306.2 162 96.9
PGSC0003DMG400033658 Solanum tuberosum HOM05D017728 ORTHO05D020821 1.7e-80 302.8 170 90.6
Nitab4.5_0000006g0280 Nicotiana tabacum HOM05D017728 ORTHO05D020821 7.6e-60 234.2 170 73.5
Nitab4.5_0004986g0050 Nicotiana tabacum HOM05D017728 ORTHO05D020821 6.0e-57 224.6 170 70.6
Peaxi162Scf00462g00061 Petunia axillaris HOM05D017728 ORTHO05D020821 1.5e-36 156.8 131 64.1
Rhsim04G0052600 Rhododendron simsii HOM05D001148 ORTHO05D000960 5.9e-20 101.7 181 38.7
Lj1A768G23 Lonicera japonica HOM05D001148 ORTHO05D000960 3.2e-18 95.9 147 41.5
Hma1.2p1_0249F.1_g102250 Hydrangea macrophylla HOM05D017728 ORTHO05D020821 4.2e-18 95.5 170 35.3
DCAR_021167 Daucus carota HOM05D001148 ORTHO05D000960 5.1e-16 88.6 184 35.9
vmacro09338 Vaccinium macrocarpon HOM05D001148 ORTHO05D000960 5.7e-15 85.1 183 35.5
Dinv05414 Davidia involucrata HOM05D001148 ORTHO05D000960 9.1e-13 77.8 124 37.1
Os02g0321800 Oryza sativa ssp. japonica HOM05D001148 ORTHO05D000960 3.9e-08 62.4 111 36.0
CSS0010760 Camellia sinensis var. sinensis HOM05D001148 ORTHO05D000960 8.8e-08 61.2 112 33.9
FAN05G4903 Fragaria x ananassa HOM05D001148 ORTHO05D000960 8.8e-08 61.2 112 35.7
Cpa.g.sc152.33 Carica papaya HOM05D001148 ORTHO05D000960 2.6e-07 59.7 117 35.0
Peaxi162Scf00307g01423 Petunia axillaris HOM05D001148 ORTHO05D000960 2.6e-07 59.7 115 32.2
Nn1g07207 Nelumbo nucifera HOM05D001148 ORTHO05D000960 3.3e-07 59.3 115 35.7
Nitab4.5_0004712g0030 Nicotiana tabacum HOM05D001148 ORTHO05D000960 3.3e-07 59.3 114 34.2
CiPaw.09G095100 Carya illinoinensis HOM05D001148 ORTHO05D000960 4.4e-07 58.9 111 34.2
Gohir.D10G011700 Gossypium hirsutum HOM05D001148 ORTHO05D000960 4.4e-07 58.9 105 37.1
Gorai.011G013000 Gossypium raimondii HOM05D001148 ORTHO05D000960 4.4e-07 58.9 105 37.1
Lj3g0004433 Lotus japonicus HOM05D001148 ORTHO05D000960 4.4e-07 58.9 116 32.8
Lalb_Chr18g0056531 Lupinus albus HOM05D001148 ORTHO05D000960 4.4e-07 58.9 110 32.7
Peaxi162Scf00394g00021 Petunia axillaris HOM05D001148 ORTHO05D000960 4.4e-07 58.9 115 32.2
Aqoxy1G03109 Aquilegia oxysepala HOM05D001148 ORTHO05D000960 5.7e-07 58.5 115 35.7
Ciclev10016648m.g Citrus clementina HOM05D001148 ORTHO05D000960 5.7e-07 58.5 116 36.2
PGSC0003DMG400022061 Solanum tuberosum HOM05D001148 ORTHO05D000960 5.7e-07 58.5 115 32.2
Duzib235G1022 Durio zibethinus HOM05D001148 ORTHO05D000960 7.4e-07 58.2 113 36.3
Actinidia09722 Actinidia chinensis HOM05D001148 ORTHO05D000960 9.7e-07 57.8 115 33.0
Gohir.A10G012300 Gossypium hirsutum HOM05D001148 ORTHO05D000960 9.7e-07 57.8 105 37.1
Lalb_Chr03g0028641 Lupinus albus HOM05D001148 ORTHO05D000960 1.3e-06 57.4 115 33.9
Duzib160G0340 Durio zibethinus HOM05D001148 ORTHO05D000960 1.7e-06 57.0 115 33.9
Manes.17G029048 Manihot esculenta HOM05D001148 ORTHO05D000960 1.7e-06 57.0 102 36.3
Nitab4.5_0000005g0230 Nicotiana tabacum HOM05D001148 ORTHO05D000960 1.7e-06 57.0 114 33.3
CSS0035765 Camellia sinensis var. sinensis HOM05D001148 ORTHO05D000960 2.2e-06 56.6 107 34.6
MD05G1349500 Malus domestica HOM05D001148 ORTHO05D000960 2.2e-06 56.6 113 33.6
Oeu051888.1 Olea europaea HOM05D001148 ORTHO05D000960 2.2e-06 56.6 106 35.8
Solyc02g032930.3 Solanum lycopersicum HOM05D001148 ORTHO05D000960 2.2e-06 56.6 114 32.5
Sopen02g011300 Solanum pennellii HOM05D001148 ORTHO05D000960 2.2e-06 56.6 114 32.5
BcaC03g16531 Brassica carinata HOM05D001148 ORTHO05D000960 2.8e-06 56.2 109 33.0
C02p43450 Brassica napus HOM05D001148 ORTHO05D000960 2.8e-06 56.2 109 33.0
BolC2t10402H Brassica oleracea HOM05D001148 ORTHO05D000960 2.8e-06 56.2 109 33.0
MBI07_g25505_MAGBIO Magnolia biondii HOM05D001148 ORTHO05D000960 4.8e-06 55.5 115 31.3
Actinidia11863 Actinidia chinensis HOM05D001148 ORTHO05D000960 6.3e-06 55.1 115 33.9
ECA236G2164 Erigeron canadensis HOM05D001148 ORTHO05D000960 6.3e-06 55.1 111 34.2
Phvul.005G115800 Phaseolus vulgaris HOM05D001148 ORTHO05D000960 6.3e-06 55.1 118 33.1
Ca_00677_v3 Cicer arietinum L. HOM05D001148 ORTHO05D000960 8.2e-06 54.7 117 33.3
COL.COLO4_31803 Corchorus olitorius HOM05D001148 ORTHO05D000960 8.2e-06 54.7 90 35.6
MBI07_g25512_MAGBIO Magnolia biondii HOM05D001148 ORTHO05D000960 8.2e-06 54.7 116 31.0
Nn1g03465 Nelumbo nucifera HOM05D001148 ORTHO05D000960 8.2e-06 54.7 115 30.4


User provided reference genes

Program Settings