Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g041570.3 Solanum lycopersicum HOM05D000097 ORTHO05D013868 3.0e-63 245.0 120 100.0
Sopen05g025510 Solanum pennellii HOM05D000006 ORTHO05D000001 2.5e-33 145.6 138 58.0
Solyc05g041470.2 Solanum lycopersicum HOM05D000097 ORTHO05D013868 1.4e-31 139.8 135 57.0
HanXRQChr01g0028891 Helianthus annuus HOM05D000097 ORTHO05D000041 1.4e-15 86.7 104 45.2
PGSC0003DMG400035765 Solanum tuberosum HOM05D000097 ORTHO05D013868 3.0e-15 85.5 74 64.9
Peaxi162Scf00226g00923 Petunia axillaris HOM05D000097 ORTHO05D000041 1.2e-14 83.6 102 48.0
Peaxi162Scf00226g00936 Petunia axillaris HOM05D000097 ORTHO05D000041 1.3e-13 80.1 98 44.9
HanXRQChr09g0244201 Helianthus annuus HOM05D000097 ORTHO05D000041 3.7e-13 78.6 102 41.2
Nitab4.5_0003104g0060 Nicotiana tabacum HOM05D000097 ORTHO05D000041 3.7e-13 78.6 96 49.0
HanXRQChr16g0512561 Helianthus annuus HOM05D000097 ORTHO05D000041 2.4e-12 75.9 114 36.8
ECA238G4427 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.2e-11 73.6 109 36.7
Lsat_1_v5_gn_6_85720 Lactuca sativa HOM05D000097 ORTHO05D000041 1.6e-11 73.2 122 33.6
Nitab4.5_0003025g0010 Nicotiana tabacum HOM05D000097 ORTHO05D000041 1.6e-11 73.2 97 42.3
vmacro10274 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.0e-11 72.8 108 38.9
HanXRQChr02g0047401 Helianthus annuus HOM05D000097 ORTHO05D000041 2.7e-11 72.4 101 37.6
HanXRQChr11g0353571 Helianthus annuus HOM05D000097 ORTHO05D000041 3.5e-11 72.0 98 37.8
Lsat_1_v5_gn_1_43320 Lactuca sativa HOM05D000097 ORTHO05D000041 3.5e-11 72.0 97 39.2
HanXRQChr17g0553721 Helianthus annuus HOM05D000097 ORTHO05D000041 4.5e-11 71.6 114 39.5
Dinv23993 Davidia involucrata HOM05D000097 ORTHO05D000041 7.7e-11 70.9 110 35.5
Lsat_1_v5_gn_1_85600 Lactuca sativa HOM05D000097 ORTHO05D000041 7.7e-11 70.9 107 37.4
ECA247G0481 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.0e-10 70.5 108 38.0
HanXRQChr13g0394051 Helianthus annuus HOM05D000097 ORTHO05D000041 1.0e-10 70.5 110 38.2
Nitab4.5_0002209g0040 Nicotiana tabacum HOM05D000097 ORTHO05D000041 1.0e-10 70.5 82 50.0
SGA_v2.0_scaffold21G09486 Striga asiatica HOM05D000097 ORTHO05D000041 1.7e-10 69.7 118 34.7
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 6.6e-10 67.8 103 38.8
ECA248G1065 Erigeron canadensis HOM05D000097 ORTHO05D000041 6.6e-10 67.8 98 32.7
SGA_v2.0_scaffold21G09420 Striga asiatica HOM05D000097 ORTHO05D000041 6.6e-10 67.8 105 35.2
Lsat_1_v5_gn_4_140740 Lactuca sativa HOM05D000097 ORTHO05D000041 8.6e-10 67.4 119 34.5
Lsat_1_v5_gn_7_39020 Lactuca sativa HOM05D000097 ORTHO05D000041 1.1e-09 67.0 128 32.0
HanXRQChr13g0394641 Helianthus annuus HOM05D000097 ORTHO05D000041 1.9e-09 66.2 111 35.1
Dinv23999 Davidia involucrata HOM05D000097 ORTHO05D000041 3.3e-09 65.5 107 41.1
HanXRQChr03g0064161 Helianthus annuus HOM05D000097 ORTHO05D013868 5.5e-09 64.7 107 36.4
Lsat_1_v5_gn_0_25401 Lactuca sativa HOM05D000097 ORTHO05D000041 5.5e-09 64.7 107 36.4
Lsat_1_v5_gn_7_44800 Lactuca sativa HOM05D000097 ORTHO05D000041 5.5e-09 64.7 123 34.1
SGA_v2.0_scaffold37G14580 Striga asiatica HOM05D000097 ORTHO05D000041 5.5e-09 64.7 103 38.8
HanXRQChr08g0223211 Helianthus annuus HOM05D000097 ORTHO05D000041 7.2e-09 64.3 104 32.7
Lsat_1_v5_gn_2_40481 Lactuca sativa HOM05D000097 ORTHO05D000041 7.2e-09 64.3 126 34.1
Lsat_1_v5_gn_7_39281 Lactuca sativa HOM05D000097 ORTHO05D000041 7.2e-09 64.3 91 38.5
Peaxi162Scf00226g00820 Petunia axillaris HOM05D000097 ORTHO05D000041 9.5e-09 63.9 116 37.1
HanXRQChr10g0303341 Helianthus annuus HOM05D000097 ORTHO05D000041 1.2e-08 63.5 99 34.3
HanXRQChr03g0064091 Helianthus annuus HOM05D000097 ORTHO05D013868 1.6e-08 63.2 100 36.0
Migut.L01556 Erythranthe guttata HOM05D000097 ORTHO05D000041 2.1e-08 62.8 133 31.6
Sopen05g025660 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-08 62.8 28 100.0
HanXRQChr03g0064111 Helianthus annuus HOM05D000097 ORTHO05D013868 2.8e-08 62.4 101 34.7
ECA236G1642 Erigeron canadensis HOM05D000006 ORTHO05D000091 3.6e-08 62.0 117 33.3
HanXRQChr03g0064621 Helianthus annuus HOM05D000097 ORTHO05D013868 3.6e-08 62.0 110 31.8
Dinv15019 Davidia involucrata HOM05D000097 ORTHO05D000041 4.7e-08 61.6 107 39.3
HanXRQChr13g0407271 Helianthus annuus HOM05D000097 ORTHO05D013868 4.7e-08 61.6 111 32.4
SGA_v2.0_scaffold21G09484 Striga asiatica HOM05D000097 ORTHO05D000041 4.7e-08 61.6 118 33.9
SGA_v2.0_scaffold91G28110 Striga asiatica HOM05D000097 ORTHO05D000041 4.7e-08 61.6 104 34.6
Lsat_1_v5_gn_7_48860 Lactuca sativa HOM05D000097 ORTHO05D000041 6.1e-08 61.2 110 30.0
ECA240G0142 Erigeron canadensis HOM05D000097 ORTHO05D000041 8.0e-08 60.8 115 34.8
Lsat_1_v5_gn_7_49061 Lactuca sativa HOM05D000097 ORTHO05D000041 8.0e-08 60.8 103 35.0
Lju99C2G6 Lonicera japonica HOM05D000097 ORTHO05D000041 8.0e-08 60.8 99 34.3
ECA236G3757 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.4e-07 60.1 116 33.6
Migut.J00929 Erythranthe guttata HOM05D000097 ORTHO05D000041 1.4e-07 60.1 109 35.8
Lsat_1_v5_gn_7_51200 Lactuca sativa HOM05D000097 ORTHO05D000041 1.4e-07 60.1 108 34.3
Lj3C929T0 Lonicera japonica HOM05D000097 ORTHO05D000041 1.4e-07 60.1 109 32.1
Lju99C0T4 Lonicera japonica HOM05D014049 ORTHO05D013593 1.4e-07 60.1 109 34.9
ECA236G2161 Erigeron canadensis HOM05D000097 ORTHO05D000041 1.8e-07 59.7 116 33.6
HanXRQChr09g0243801 Helianthus annuus HOM05D000097 ORTHO05D000041 1.8e-07 59.7 102 32.4
HanXRQChr09g0243851 Helianthus annuus HOM05D000046 ORTHO05D000472 1.8e-07 59.7 99 37.4
Lsat_1_v5_gn_7_50541 Lactuca sativa HOM05D000097 ORTHO05D000041 1.8e-07 59.7 108 34.3
HanXRQChr02g0046131 Helianthus annuus HOM05D000097 ORTHO05D000041 3.0e-07 58.9 103 32.0
HanXRQChr09g0243621 Helianthus annuus HOM05D000097 ORTHO05D000041 3.0e-07 58.9 110 30.9
Lsat_1_v5_gn_8_125660 Lactuca sativa HOM05D000097 ORTHO05D000041 3.0e-07 58.9 120 30.8
ECA234G4647 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.0e-07 58.5 115 30.4
HanXRQChr11g0353581 Helianthus annuus HOM05D000097 ORTHO05D000041 5.2e-07 58.2 83 36.1
HanXRQChr04g0103301 Helianthus annuus HOM05D000097 ORTHO05D013868 6.8e-07 57.8 106 35.8
ECA246G0417 Erigeron canadensis HOM05D000097 ORTHO05D000041 8.9e-07 57.4 101 35.6
Dinv10726 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-06 57.0 114 36.0
Lsat_1_v5_gn_7_50661 Lactuca sativa HOM05D000097 ORTHO05D000041 1.5e-06 56.6 99 38.4
Lj6A385G50 Lonicera japonica HOM05D000097 ORTHO05D000041 1.5e-06 56.6 102 35.3
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 2.0e-06 56.2 108 37.0
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.6e-06 55.8 119 28.6
ECA248G3700 Erigeron canadensis HOM05D000097 ORTHO05D000041 2.6e-06 55.8 103 32.0
vmacro10270 Vaccinium macrocarpon HOM05D000097 ORTHO05D013593 2.6e-06 55.8 130 31.5
ECA240G4269 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.4e-06 55.5 105 31.4
ECA248G0893 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.4e-06 55.5 113 31.0
Lsat_1_v5_gn_7_37621 Lactuca sativa HOM05D000097 ORTHO05D000041 3.4e-06 55.5 96 37.5
Dinv13269 Davidia involucrata HOM05D000097 ORTHO05D000041 4.4e-06 55.1 114 29.8
SEGI_03139 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 5.7e-06 54.7 89 36.0
HanXRQChr10g0282341 Helianthus annuus HOM05D000097 ORTHO05D000041 7.5e-06 54.3 97 33.0
Oeu003487.1 Olea europaea HOM05D000002 ORTHO05D000001 7.5e-06 54.3 103 30.1
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.5e-06 54.3 111 36.0
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.8e-06 53.9 110 32.7
Lsat_1_v5_gn_9_86401 Lactuca sativa HOM05D000097 ORTHO05D013868 9.8e-06 53.9 107 31.8
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.8e-06 53.9 110 31.8


User provided reference genes

Program Settings