Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g041310.1 Solanum lycopersicum HOM05D000573 ORTHO05D026937 2.0e-18 94.7 48 100.0
Solyc05g041940.1 Solanum lycopersicum HOM05D000573 ORTHO05D026937 8.4e-17 89.4 48 93.8
Sopen05g022660 Solanum pennellii HOM05D000573 ORTHO05D000425 3.5e-15 84.0 47 89.4
Solyc05g026350.2 Solanum lycopersicum HOM05D000573 ORTHO05D000425 3.3e-13 77.4 47 83.0
Solyc05g041300.3 Solanum lycopersicum HOM05D000573 ORTHO05D000425 3.3e-13 77.4 47 87.2
Solyc05g041690.3 Solanum lycopersicum HOM05D000573 ORTHO05D000425 6.9e-11 69.7 47 78.7
CAN.G354.25 Capsicum annuum HOM05D000573 ORTHO05D000425 1.3e-09 65.5 42 73.8
CAN.G354.31 Capsicum annuum HOM05D000573 ORTHO05D000425 4.2e-08 60.5 48 66.7
Sc08g0008270 Simmondsia chinensis HOM05D000573 ORTHO05D000425 3.5e-07 57.4 43 62.8
Solyc03g032220.3 Solanum lycopersicum HOM05D000573 ORTHO05D000425 4.6e-07 57.0 47 63.8
BcaNung02436 Brassica carinata HOM05D000573 ORTHO05D000425 7.9e-07 56.2 43 60.5
Thhalv10026121m.g Eutrema salsugineum HOM05D000573 ORTHO05D000425 7.9e-07 56.2 43 62.8
Gohir.D06G069400 Gossypium hirsutum HOM05D000573 ORTHO05D000425 7.9e-07 56.2 43 65.1
Gorai.010G081000 Gossypium raimondii HOM05D000573 ORTHO05D000425 7.9e-07 56.2 43 65.1
Nitab4.5_0001492g0030 Nicotiana tabacum HOM05D000573 ORTHO05D000425 1.0e-06 55.8 39 71.8
Sp7g24220 Schrenkiella parvula HOM05D000573 ORTHO05D000425 1.0e-06 55.8 43 60.5
CSS0041417 Camellia sinensis var. sinensis HOM05D000573 ORTHO05D000425 1.3e-06 55.5 41 63.4
CAN.G46.13 Capsicum annuum HOM05D000573 ORTHO05D000425 1.3e-06 55.5 37 73.0
AL7G26750 Arabidopsis lyrata HOM05D000573 ORTHO05D000425 1.8e-06 55.1 43 60.5
FvH4_1g06841 Fragaria vesca HOM05D000573 ORTHO05D000425 1.8e-06 55.1 43 60.5
MD02G1073100 Malus domestica HOM05D000573 ORTHO05D000425 2.3e-06 54.7 42 59.5
MSTRG.10582 Avicennia marina HOM05D000573 ORTHO05D000425 3.0e-06 54.3 41 65.9
Gohir.A06G070800 Gossypium hirsutum HOM05D000573 ORTHO05D000425 3.0e-06 54.3 39 66.7
BcaC09g50682 Brassica carinata HOM05D000573 ORTHO05D000425 3.9e-06 53.9 42 59.5
C01p22070 Brassica napus HOM05D000573 ORTHO05D000425 3.9e-06 53.9 42 59.5
BolC1t02136H Brassica oleracea HOM05D000573 ORTHO05D000425 3.9e-06 53.9 42 59.5
Duzib187G1209 Durio zibethinus HOM05D000573 ORTHO05D000425 3.9e-06 53.9 43 62.8
Migut.K00576 Erythranthe guttata HOM05D000573 ORTHO05D000425 3.9e-06 53.9 46 56.5
Solyc05g041640.3 Solanum lycopersicum HOM05D000573 ORTHO05D000425 3.9e-06 53.9 26 96.2
Solyc05g041660.1 Solanum lycopersicum HOM05D000573 ORTHO05D026937 3.9e-06 53.9 26 96.2
C03p89130 Brassica napus HOM05D000573 ORTHO05D000425 5.1e-06 53.5 46 54.3
BolC3t21224H Brassica oleracea HOM05D000573 ORTHO05D000425 5.1e-06 53.5 46 54.3
Eucgr.C00925 Eucalyptus grandis HOM05D000573 ORTHO05D000425 5.1e-06 53.5 42 57.1
FAN23G2703 Fragaria x ananassa HOM05D000573 ORTHO05D000425 5.1e-06 53.5 43 58.1
FAN26G0911 Fragaria x ananassa HOM05D000573 ORTHO05D000425 5.1e-06 53.5 43 58.1
FAN26G2555 Fragaria x ananassa HOM05D000573 ORTHO05D000425 5.1e-06 53.5 43 58.1
PGR142G2997 Punica granatum HOM05D000573 ORTHO05D000425 5.1e-06 53.5 42 57.1
Ciclev10009342m.g Citrus clementina HOM05D000573 ORTHO05D000425 6.7e-06 53.1 39 66.7
COL.COLO4_18236 Corchorus olitorius HOM05D000573 ORTHO05D000425 6.7e-06 53.1 38 65.8
QL02p063425 Quercus lobata HOM05D000573 ORTHO05D000425 6.7e-06 53.1 41 61.0
RcHm_v2.0_Chr2g0092631 Rosa chinensis HOM05D000573 ORTHO05D000425 6.7e-06 53.1 46 54.3
BcaC01g01185 Brassica carinata HOM05D000573 ORTHO05D000425 8.7e-06 52.8 43 58.1
BcaC01g01186 Brassica carinata HOM05D000573 ORTHO05D000425 8.7e-06 52.8 43 58.1
A01p17510 Brassica napus HOM05D000573 ORTHO05D000425 8.7e-06 52.8 42 57.1
BraA01t01705Z Brassica rapa HOM05D000573 ORTHO05D000425 8.7e-06 52.8 42 57.1
Cpa.g.sc1655.2 Carica papaya HOM05D000573 ORTHO05D000425 8.7e-06 52.8 40 62.5
Haze_25875 Corylus avellana HOM05D000573 ORTHO05D000425 8.7e-06 52.8 39 64.1
PGSC0003DMG400002387 Solanum tuberosum HOM05D000573 ORTHO05D000425 8.7e-06 52.8 38 68.4


User provided reference genes

Program Settings