Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g025970.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.4e-53 211.5 111 100.0
Solyc12g038100.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 2.6e-37 158.7 112 76.8
Sopen12g017720 Solanum pennellii HOM05D000006 ORTHO05D000001 1.5e-29 132.9 112 67.0
Nitab4.5_0002521g0050 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.4e-20 100.5 76 72.4
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.7e-18 95.5 96 53.1
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.1e-17 91.3 96 51.0
Solyc12g039110.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.7e-17 90.5 90 54.4
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.3e-15 84.3 97 46.4
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.4e-14 82.4 70 55.7
Nitab4.5_0002098g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.4e-14 82.4 70 67.1
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.0e-12 77.0 95 48.4
Peaxi162Scf00718g00053 Petunia axillaris HOM05D000002 ORTHO05D000001 8.5e-12 73.9 100 43.0
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 1.9e-11 72.8 101 40.6
Sopen03g011550 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-11 72.0 83 50.6
Peaxi162Scf00153g01013 Petunia axillaris HOM05D000002 ORTHO05D000001 5.5e-11 71.2 108 38.9
Peaxi162Scf00028g00051 Petunia axillaris HOM05D000002 ORTHO05D000001 1.6e-10 69.7 94 45.7
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 1.6e-10 69.7 109 40.4
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-10 69.3 68 44.1
Peaxi162Scf00136g00193 Petunia axillaris HOM05D000002 ORTHO05D000001 2.1e-10 69.3 103 39.8
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.1e-10 67.8 108 37.0
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.9e-10 67.4 70 45.7
Sopen01g017880 Solanum pennellii HOM05D000002 ORTHO05D000001 7.9e-10 67.4 98 38.8
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.8e-09 66.2 79 39.2
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-09 66.2 61 44.3
Atru.chr3.2937 Acer truncatum HOM05D000002 ORTHO05D000001 3.0e-09 65.5 112 38.4
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.0e-09 65.5 71 42.3
Nitab4.5_0000653g0120 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.8e-09 63.9 103 36.9
Peaxi162Scf00203g00072 Petunia axillaris HOM05D000002 ORTHO05D000001 8.8e-09 63.9 69 43.5
Peaxi162Scf00404g00108 Petunia axillaris HOM05D000002 ORTHO05D000001 8.8e-09 63.9 40 77.5
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 1.1e-08 63.5 109 38.5
Peaxi162Scf00006g00121 Petunia axillaris HOM05D000002 ORTHO05D000001 1.1e-08 63.5 111 35.1
Nitab4.5_0000027g0330 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.5e-08 63.2 112 36.6
TWI59G0793 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.5e-08 63.2 111 31.5
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.5e-08 62.4 106 33.0
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-08 62.4 72 40.3
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 2.5e-08 62.4 68 41.2
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.5e-08 62.4 99 35.4
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.7e-08 61.2 107 35.5
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 7.4e-08 60.8 72 44.4
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 7.4e-08 60.8 103 35.9
TWI77G0605 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.3e-07 60.1 105 36.2
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.2e-07 59.3 99 32.3
Nitab4.5_0004600g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.2e-07 59.3 91 37.4
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 2.8e-07 58.9 119 35.3
Hma1.2p1_0763F.1_g214730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.8e-07 58.2 88 37.5
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 4.8e-07 58.2 59 44.1
TWI73G1050 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 4.8e-07 58.2 75 36.0
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.8e-07 58.2 110 35.5
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 8.2e-07 57.4 103 31.1
Eucgr.H00940 Eucalyptus grandis HOM05D000002 ORTHO05D000001 8.2e-07 57.4 66 37.9
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 1.1e-06 57.0 70 38.6
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.1e-06 57.0 70 38.6
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 1.1e-06 57.0 100 37.0
Dinv39044 Davidia involucrata HOM05D000016 ORTHO05D000109 1.4e-06 56.6 78 34.6
ECA233G4466 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 56.6 109 33.0
Eucgr.L00647 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.4e-06 56.6 71 39.4
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 1.4e-06 56.6 106 32.1
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-06 56.2 108 37.0
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.4e-06 55.8 112 29.5
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 2.4e-06 55.8 99 36.4
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 2.4e-06 55.8 99 36.4
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-06 55.5 97 33.0
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 4.1e-06 55.1 129 30.2
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 4.1e-06 55.1 109 34.9
Prupe.4G230800 Prunus persica HOM05D000002 ORTHO05D000001 4.1e-06 55.1 59 39.0
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 5.3e-06 54.7 99 33.3
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 6.9e-06 54.3 64 35.9
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 6.9e-06 54.3 104 35.6
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 6.9e-06 54.3 59 42.4
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 9.1e-06 53.9 96 37.5
CSS0025666 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.1e-06 53.9 73 37.0
Ciclev10006756m.g Citrus clementina HOM05D047940 ORTHO05D000001 9.1e-06 53.9 66 34.8
COL.COLO4_16378 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.1e-06 53.9 63 36.5


User provided reference genes

Program Settings