Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.2e-59 231.5 113 100.0
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.3e-31 137.5 102 69.6
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-28 130.2 120 55.8
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-27 125.6 83 78.3
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.1e-26 120.9 78 76.9
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-25 119.8 117 54.7
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 3.7e-23 111.7 111 53.2
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-23 111.7 120 50.0
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 7.0e-22 107.5 108 50.0
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-21 106.7 74 68.9
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.2e-21 106.7 74 68.9
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-21 106.3 109 54.1
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-19 99.4 87 56.3
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 2.5e-19 99.0 102 52.9
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-19 99.0 86 58.1
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-19 99.0 89 55.1
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.3e-19 98.2 87 56.3
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-18 96.7 102 51.0
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 1.4e-17 93.2 89 49.4
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-17 93.2 85 54.1
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-17 93.2 87 49.4
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 4.0e-17 91.7 105 42.9
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 5.2e-17 91.3 72 59.7
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 6.8e-17 90.9 104 47.1
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-16 88.6 95 48.4
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 4.4e-16 88.2 78 53.8
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-15 86.7 65 66.2
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 1.7e-15 86.3 107 41.1
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-15 86.3 69 56.5
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-15 85.9 85 50.6
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-15 85.1 95 48.4
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 6.4e-15 84.3 89 44.9
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-14 83.6 84 48.8
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.4e-14 83.2 88 50.0
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-14 82.8 92 46.7
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.4e-14 82.4 62 67.7
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 9.2e-14 80.5 86 48.8
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-13 80.1 72 52.8
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-13 77.8 97 42.3
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-12 77.0 63 57.1
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 2.3e-12 75.9 111 38.7
Peaxi162Scf00992g00013 Petunia axillaris HOM05D003888 ORTHO05D007163 3.0e-12 75.5 88 40.9
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.0e-12 75.5 66 56.1
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.9e-12 75.1 86 41.9
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.1e-11 73.6 111 37.8
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.5e-11 73.2 79 46.8
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 2.5e-11 72.4 83 41.0
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-11 72.4 58 60.3
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-11 72.4 69 47.8
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.6e-11 71.2 69 47.8
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-10 69.7 76 44.7
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 2.8e-10 68.9 69 47.8
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-10 68.6 67 49.3
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 8.1e-10 67.4 67 44.8
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.1e-10 67.4 63 49.2
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.1e-10 67.4 69 46.4
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-09 67.0 69 46.4
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-09 67.0 77 41.6
Peaxi162Scf00230g00143 Petunia axillaris HOM05D003888 ORTHO05D007163 1.8e-09 66.2 60 53.3
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 1.8e-09 66.2 49 61.2
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.1e-09 65.5 98 32.7
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-09 65.5 72 45.8
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-09 64.3 94 34.0
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.8e-09 64.3 78 42.3
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-08 63.5 98 30.6
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.2e-08 63.5 95 37.9
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 1.2e-08 63.5 67 47.8
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-08 63.2 67 43.3
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-08 62.8 69 44.9
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 2.6e-08 62.4 78 41.0
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 3.4e-08 62.0 99 33.3
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 3.4e-08 62.0 99 33.3
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 3.4e-08 62.0 99 33.3
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 3.4e-08 62.0 99 33.3
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-08 61.6 62 48.4
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.8e-08 61.2 59 52.5
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 7.5e-08 60.8 99 33.3
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 7.5e-08 60.8 62 48.4
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 9.9e-08 60.5 77 44.2
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 1.3e-07 60.1 69 43.5
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 1.3e-07 60.1 83 37.3
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-07 60.1 58 51.7
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-07 59.7 78 41.0
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.2e-07 59.3 99 35.4
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.2e-07 59.3 74 40.5
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 3.7e-07 58.5 71 39.4
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-07 58.5 82 42.7
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.9e-07 58.2 98 35.7
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.4e-06 56.6 106 33.0
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 1.9e-06 56.2 81 35.8
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.9e-06 56.2 98 30.6
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 5.4e-06 54.7 100 33.0
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.4e-06 54.7 83 32.5
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 7.1e-06 54.3 96 32.3


User provided reference genes

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