Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 9.6e-59 229.9 116 100.0
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 9.0e-57 223.4 116 97.4
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.9e-51 205.7 116 90.5
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.6e-45 186.0 116 82.8
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 3.6e-45 184.9 116 82.8
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 3.9e-44 181.4 116 79.3
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 6.7e-36 154.1 95 75.8
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 5.7e-35 151.0 103 69.9
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.7e-34 149.4 116 65.5
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.2e-34 149.1 94 76.6
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 4.8e-34 147.9 103 74.8
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 1.1e-33 146.7 94 75.5
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.1e-33 146.7 94 75.5
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.1e-33 146.7 94 75.5
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 1.4e-33 146.4 124 62.9
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 3.1e-33 145.2 96 75.0
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 4.1e-33 144.8 105 71.4
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 5.3e-33 144.4 105 69.5
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 5.3e-33 144.4 119 65.5
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 5.3e-33 144.4 94 74.5
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 5.3e-33 144.4 117 66.7
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 7.0e-33 144.1 121 65.3
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 9.1e-33 143.7 103 70.9
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 1.2e-32 143.3 81 85.2
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 1.2e-32 143.3 96 71.9
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.2e-32 143.3 97 71.1
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.2e-32 143.3 119 64.7
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 1.2e-32 143.3 116 64.7
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 1.5e-32 142.9 103 70.9
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 1.5e-32 142.9 103 70.9
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 1.5e-32 142.9 98 73.5
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 2.0e-32 142.5 99 72.7
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 2.0e-32 142.5 102 69.6
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 2.6e-32 142.1 104 71.2
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 2.6e-32 142.1 115 62.6
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 5.9e-32 141.0 81 84.0
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 5.9e-32 141.0 80 82.5
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 5.9e-32 141.0 118 61.9
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 5.9e-32 141.0 114 64.0
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 7.7e-32 140.6 102 65.7
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 7.7e-32 140.6 105 67.6
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.0e-31 140.2 116 64.7
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.0e-31 140.2 118 61.9
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.0e-31 140.2 118 61.9
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.3e-31 139.8 95 68.4
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 1.3e-31 139.8 116 62.9
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 1.3e-31 139.8 90 75.6
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.3e-31 139.8 92 76.1
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 1.7e-31 139.4 116 62.9
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 2.9e-31 138.7 98 73.5
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.9e-31 138.7 103 68.9
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 3.8e-31 138.3 79 83.5
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 5.0e-31 137.9 89 73.0
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 6.5e-31 137.5 113 67.3
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 8.5e-31 137.1 115 63.5
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.1e-30 136.7 118 62.7
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 1.5e-30 136.3 97 68.0
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 1.9e-30 136.0 86 77.9
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 4.2e-30 134.8 98 68.4
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 5.5e-30 134.4 77 81.8
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 9.4e-30 133.7 125 59.2
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.6e-29 132.9 78 76.9
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.6e-29 132.9 116 58.6
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.6e-29 132.9 116 61.2
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 2.1e-29 132.5 117 60.7
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 2.7e-29 132.1 79 79.7
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 4.7e-29 131.3 80 81.2
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 6.1e-29 131.0 73 87.7
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 1.4e-28 129.8 105 66.7
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 1.4e-28 129.8 116 60.3
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.8e-28 129.4 112 61.6
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 2.3e-28 129.0 77 79.2
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 2.3e-28 129.0 77 79.2
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 2.3e-28 129.0 80 77.5
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.3e-28 129.0 77 81.8
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 3.0e-28 128.6 99 61.6
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 3.9e-28 128.3 87 72.4
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 8.8e-28 127.1 89 73.0
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 1.5e-27 126.3 74 82.4
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 2.6e-27 125.6 121 58.7
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 2.6e-27 125.6 118 59.3
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 7.4e-27 124.0 99 67.7
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 7.4e-27 124.0 79 74.7
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 2.8e-26 122.1 107 61.7
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 4.8e-26 121.3 141 48.9
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 6.3e-26 120.9 85 70.6
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 8.2e-26 120.6 69 76.8
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 5.9e-24 114.4 88 65.9
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 6.5e-23 110.9 71 70.4
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 4.2e-22 108.2 70 68.6
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 5.5e-22 107.8 116 54.3
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.6e-21 106.3 72 72.2
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 9.7e-19 97.1 49 91.8
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 4.8e-18 94.7 48 87.5
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 5.9e-16 87.8 84 52.4
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 2.9e-15 85.5 58 69.0
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 5.0e-15 84.7 84 52.4
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.6e-08 63.2 69 46.4


User provided reference genes

Program Settings