Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g024230.3 Solanum lycopersicum HOM05D000497 ORTHO05D051197 8.1e-44 179.9 82 100.0
Sopen04g008650 Solanum pennellii HOM05D000497 ORTHO05D051197 3.8e-41 171.0 82 95.1
Sopen08g030250 Solanum pennellii HOM05D000497 ORTHO05D000020 2.3e-38 161.8 82 90.2
Solyc08g081960.3 Solanum lycopersicum HOM05D000497 ORTHO05D000020 8.7e-38 159.8 82 90.2
PGSC0003DMG400012305 Solanum tuberosum HOM05D000497 ORTHO05D000020 1.4e-35 152.5 82 89.0
Nitab4.5_0000223g0100 Nicotiana tabacum HOM05D000497 ORTHO05D000020 1.5e-21 105.9 85 62.4
Nitab4.5_0004161g0090 Nicotiana tabacum HOM05D000497 ORTHO05D000020 1.5e-21 105.9 85 62.4
Peaxi162Scf00074g00125 Petunia axillaris HOM05D000497 ORTHO05D000020 3.3e-21 104.8 89 58.4
CAN.G532.90 Capsicum annuum HOM05D000497 ORTHO05D000020 3.4e-18 94.7 82 62.2
Lj2P172T25 Lonicera japonica HOM05D000497 ORTHO05D000020 2.3e-14 82.0 82 54.9
Lj8P211T8 Lonicera japonica HOM05D000497 ORTHO05D000020 3.9e-14 81.3 87 49.4
Hma1.2p1_0952F.1_g240855 Hydrangea macrophylla HOM05D000497 ORTHO05D000020 3.3e-13 78.2 85 51.8
Dinv38866 Davidia involucrata HOM05D000497 ORTHO05D000020 9.6e-13 76.6 87 51.7
Rhsim02G0240600 Rhododendron simsii HOM05D000497 ORTHO05D000020 3.7e-12 74.7 90 45.6
Actinidia01401 Actinidia chinensis HOM05D000497 ORTHO05D000020 2.4e-11 72.0 89 43.8
Dinv37558 Davidia involucrata HOM05D000497 ORTHO05D000020 2.4e-11 72.0 79 51.9
Hma1.2p1_0359F.1_g135450 Hydrangea macrophylla HOM05D000497 ORTHO05D000020 2.0e-10 68.9 85 42.4
SalBow1G2339 Salvia bowleyana HOM05D000497 ORTHO05D000020 4.5e-10 67.8 85 47.1
CiPaw.12G085600 Carya illinoinensis HOM05D000497 ORTHO05D000020 7.6e-10 67.0 92 44.6
Migut.E01228 Erythranthe guttata HOM05D000497 ORTHO05D000020 1.0e-09 66.6 81 50.6
Cfa012853 Carpinus fangiana HOM05D000497 ORTHO05D000020 1.3e-09 66.2 87 44.8
Prupe.5G114100 Prunus persica HOM05D000497 ORTHO05D000020 2.2e-09 65.5 92 40.2
Atru.chr9.2058 Acer truncatum HOM05D000497 ORTHO05D000020 2.9e-09 65.1 82 45.1
Lsat_1_v5_gn_3_10000 Lactuca sativa HOM05D000497 ORTHO05D000020 2.9e-09 65.1 88 43.2
Manes.01G046200 Manihot esculenta HOM05D000497 ORTHO05D000020 6.5e-09 63.9 91 41.8
Haze_08685 Corylus avellana HOM05D000497 ORTHO05D000020 1.1e-08 63.2 86 44.2
QL02p031592 Quercus lobata HOM05D000497 ORTHO05D000020 1.1e-08 63.2 94 37.2
MSTRG.1824 Avicennia marina HOM05D000497 ORTHO05D000020 1.4e-08 62.8 92 45.7
FAN08G1813 Fragaria x ananassa HOM05D000497 ORTHO05D000020 1.4e-08 62.8 94 42.6
MD06G1100500 Malus domestica HOM05D000497 ORTHO05D000020 1.4e-08 62.8 96 40.6
RcHm_v2.0_Chr7g0195581 Rosa chinensis HOM05D000497 ORTHO05D000020 1.4e-08 62.8 91 44.0
SalBow1G0973 Salvia bowleyana HOM05D000497 ORTHO05D000020 1.4e-08 62.8 81 45.7
vmacro11449 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 2.5e-08 62.0 113 35.4
unitig_46.g18537 Utricularia gibba HOM05D000497 ORTHO05D000020 3.2e-08 61.6 81 42.0
Actinidia04217 Actinidia chinensis HOM05D000497 ORTHO05D000020 4.2e-08 61.2 90 40.0
Oeu011810.1 Olea europaea HOM05D000497 ORTHO05D000020 4.2e-08 61.2 89 46.1
CiPaw.11G124700 Carya illinoinensis HOM05D000497 ORTHO05D000020 5.5e-08 60.8 91 44.0
Migut.A00686 Erythranthe guttata HOM05D000497 ORTHO05D000020 5.5e-08 60.8 83 45.8
FvH4_5g03920 Fragaria vesca HOM05D000497 ORTHO05D000020 5.5e-08 60.8 94 41.5
FAN13G3183 Fragaria x ananassa HOM05D000497 ORTHO05D000020 1.2e-07 59.7 94 41.5
Manes.02G013200 Manihot esculenta HOM05D000497 ORTHO05D000020 1.2e-07 59.7 89 40.4
TAR375G1156 Trochodendron aralioides HOM05D000497 ORTHO05D000020 1.2e-07 59.7 83 43.4
MD14G1120000 Malus domestica HOM05D000497 ORTHO05D000020 2.1e-07 58.9 100 37.0
FAN04G0750 Fragaria x ananassa HOM05D000497 ORTHO05D000020 2.7e-07 58.5 94 40.4
FAN13G0894 Fragaria x ananassa HOM05D000497 ORTHO05D000020 2.7e-07 58.5 94 41.5
DCAR_008538 Daucus carota HOM05D000497 ORTHO05D000020 3.5e-07 58.2 69 47.8
SGA_v2.0_scaffold111G31443 Striga asiatica HOM05D000497 ORTHO05D000020 3.5e-07 58.2 82 43.9
COL.COLO4_21270 Corchorus olitorius HOM05D000497 ORTHO05D000020 4.6e-07 57.8 87 39.1
PGR042G2011 Punica granatum HOM05D000497 ORTHO05D000020 4.6e-07 57.8 103 36.9
BcaNung03191 Brassica carinata HOM05D000497 ORTHO05D000020 6.1e-07 57.4 77 45.5
C07p53070 Brassica napus HOM05D000497 ORTHO05D000020 6.1e-07 57.4 77 45.5
BolC7t45805H Brassica oleracea HOM05D000497 ORTHO05D000020 6.1e-07 57.4 77 45.5
Duzib084G0480 Durio zibethinus HOM05D000497 ORTHO05D000020 6.1e-07 57.4 87 41.4
HanXRQChr17g0535351 Helianthus annuus HOM05D000497 ORTHO05D000020 6.1e-07 57.4 89 40.4
MSTRG.11938 Avicennia marina HOM05D000497 ORTHO05D000020 7.9e-07 57.0 91 37.4
ECA233G0051 Erigeron canadensis HOM05D000497 ORTHO05D000020 1.3e-06 56.2 91 41.8
Peaxi162Scf00102g01717 Petunia axillaris HOM05D000497 ORTHO05D000020 1.3e-06 56.2 77 44.2
TAR374G1231 Trochodendron aralioides HOM05D000497 ORTHO05D000020 1.3e-06 56.2 85 37.6
MSTRG.13871 Avicennia marina HOM05D000497 ORTHO05D000020 2.3e-06 55.5 80 46.2
BcaNung05925 Brassica carinata HOM05D000497 ORTHO05D000020 3.0e-06 55.1 83 43.4
ECA246G1887 Erigeron canadensis HOM05D000497 ORTHO05D000020 3.0e-06 55.1 88 39.8
Lsat_1_v5_gn_6_11860 Lactuca sativa HOM05D000497 ORTHO05D000020 3.0e-06 55.1 77 42.9
A03p54730 Brassica napus HOM05D000497 ORTHO05D000020 3.9e-06 54.7 79 46.8
BraA03t14541Z Brassica rapa HOM05D000497 ORTHO05D000020 3.9e-06 54.7 79 46.8
TWI60G0733 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 3.9e-06 54.7 85 38.8
SGA_v2.0_scaffold173G39099 Striga asiatica HOM05D000497 ORTHO05D000020 5.1e-06 54.3 87 40.2
TWI15G0459 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 5.1e-06 54.3 76 39.5
BcaC01g04640 Brassica carinata HOM05D000497 ORTHO05D000020 8.7e-06 53.5 68 45.6
C03p35360 Brassica napus HOM05D000497 ORTHO05D000020 8.7e-06 53.5 68 45.6
BolC3t15848H Brassica oleracea HOM05D000497 ORTHO05D000020 8.7e-06 53.5 68 45.6
CANSAT21G1394 Cannabis sativa HOM05D000497 ORTHO05D000020 8.7e-06 53.5 92 41.3
DCAR_005023 Daucus carota HOM05D000497 ORTHO05D000020 8.7e-06 53.5 66 48.5
SGA_v2.0_scaffold96G28986 Striga asiatica HOM05D000497 ORTHO05D000020 8.7e-06 53.5 79 41.8
TWI81G0255 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 8.7e-06 53.5 74 40.5


User provided reference genes

Program Settings