Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 1.7e-143 512.7 258 100.0
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 1.5e-139 499.6 258 97.7
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 4.1e-126 454.9 265 89.4
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 7.8e-85 317.8 278 66.2
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.6e-80 302.8 291 63.9
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.9e-71 272.7 278 61.2
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 7.1e-70 268.1 278 59.7
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 3.5e-53 212.6 270 51.9
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 2.3e-52 209.9 266 47.4
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 3.0e-52 209.5 273 49.1
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 1.3e-50 204.1 277 48.7
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 1.8e-49 200.3 277 45.8
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 6.9e-49 198.4 255 46.7
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 6.9e-49 198.4 276 47.1
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 1.2e-48 197.6 274 47.4
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 2.6e-48 196.4 259 46.7
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.7e-47 193.7 273 47.3
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.7e-47 193.7 273 47.3
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 2.2e-47 193.4 269 46.8
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 5.0e-47 192.2 276 45.7
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 6.5e-47 191.8 273 46.9
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 8.4e-47 191.4 261 48.3
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 1.4e-46 190.7 275 44.7
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.6e-45 187.2 282 44.0
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 1.0e-44 184.5 263 46.0
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 1.3e-44 184.1 256 47.7
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 1.8e-44 183.7 267 44.6
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 3.0e-44 183.0 252 48.8
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 3.9e-44 182.6 252 46.8
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 5.1e-44 182.2 281 45.9
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 6.7e-44 181.8 280 44.3
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 6.7e-44 181.8 248 48.0
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 1.1e-43 181.0 256 46.5
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 1.3e-42 177.6 256 44.1
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 1.6e-42 177.2 274 43.4
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 2.2e-42 176.8 258 45.7
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 3.7e-42 176.0 258 46.5
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 6.3e-42 175.3 272 43.4
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 1.1e-41 174.5 263 43.3
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 1.4e-41 174.1 250 46.4
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 3.1e-41 172.9 258 45.0
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 4.1e-41 172.6 255 45.5
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 4.1e-41 172.6 266 44.7
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 5.3e-41 172.2 259 43.2
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 6.9e-41 171.8 267 43.4
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 9.0e-41 171.4 272 43.0
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 1.5e-40 170.6 260 44.6
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 3.4e-40 169.5 253 44.3
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 5.9e-40 168.7 248 41.9
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 2.2e-39 166.8 267 44.6
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 2.9e-39 166.4 250 44.4
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 3.2e-38 162.9 252 42.9
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 7.2e-38 161.8 267 42.3
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 7.2e-38 161.8 267 42.3
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 6.1e-37 158.7 266 41.7
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 6.1e-37 158.7 219 48.9
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 7.9e-37 158.3 266 41.7
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 7.9e-37 158.3 266 41.7
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 1.0e-36 157.9 261 41.4
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 1.0e-36 157.9 261 41.4
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 1.8e-36 157.1 280 42.1
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 2.3e-36 156.8 275 41.5
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 3.0e-36 156.4 176 52.3
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 1.5e-35 154.1 215 48.4
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 2.0e-35 153.7 269 40.9
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 5.7e-35 152.1 278 42.1
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 1.3e-34 151.0 261 44.1
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 2.2e-34 150.2 279 40.5
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.8e-34 149.8 222 44.1
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 2.8e-34 149.8 269 42.0
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 6.3e-34 148.7 279 40.1
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.1e-33 147.9 223 44.4
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 3.1e-33 146.4 203 46.3
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 5.3e-33 145.6 241 42.7
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 4.5e-32 142.5 262 40.5
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 4.5e-32 142.5 250 39.6
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 5.9e-32 142.1 264 40.9
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 7.7e-32 141.7 227 41.9
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 5.0e-31 139.0 201 48.3
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 6.5e-31 138.7 236 44.1
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 7.2e-30 135.2 233 40.8
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 7.2e-30 135.2 233 40.8
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 9.4e-30 134.8 273 38.5
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 1.6e-29 134.0 273 38.8
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.6e-29 134.0 273 38.8
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.6e-29 132.9 274 39.1
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 4.7e-29 132.5 274 39.4
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 4.7e-29 132.5 341 34.6
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 4.7e-29 132.5 189 47.6
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 7.9e-29 131.7 274 39.8
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 2.0e-27 127.1 240 41.7
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 2.0e-27 127.1 240 41.7
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 1.3e-26 124.4 315 34.9
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 8.2e-26 121.7 175 42.9
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 8.5e-23 111.7 223 38.6
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 1.9e-22 110.5 205 39.5
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.2e-21 107.8 323 31.9
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 1.0e-20 104.8 164 42.7
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 6.3e-18 95.5 129 45.7
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.2e-15 87.0 201 34.8
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 9.4e-14 81.6 109 48.6
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.1e-13 80.5 80 61.2
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 5.9e-08 62.4 110 33.6
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 5.9e-08 62.4 110 33.6
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 1.7e-07 60.8 104 34.6
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 2.2e-07 60.5 148 33.1


User provided reference genes

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