Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g023970.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.6e-58 229.2 113 100.0
Thhalv10015628m.g Eutrema salsugineum HOM05D007877 ORTHO05D009957 2.2e-36 155.6 113 76.1
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 9.8e-32 140.2 124 66.9
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 9.8e-32 140.2 124 66.9
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 9.8e-32 140.2 124 66.9
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 9.8e-32 140.2 124 66.9
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 1.2e-29 133.3 123 65.9
HanXRQChr00c0234g0572751 Helianthus annuus HOM05D007877 ORTHO05D009957 1.2e-29 133.3 123 65.9
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 1.2e-29 133.3 123 65.9
Lsat_1_v5_gn_2_125060 Lactuca sativa HOM05D007877 ORTHO05D009957 1.2e-29 133.3 123 65.9
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 1.6e-29 132.9 124 65.3
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 2.0e-29 132.5 124 65.3
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 7.8e-29 130.6 124 64.5
BolC4t23493H Brassica oleracea HOM05D007877 ORTHO05D009957 1.3e-28 129.8 127 62.2
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 2.3e-28 129.0 127 62.2
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 2.9e-28 128.6 127 62.2
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 2.9e-28 128.6 126 62.7
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 6.6e-28 127.5 129 61.2
CAN.G1159.16 Capsicum annuum HOM05D007877 ORTHO05D009957 9.5e-27 123.6 123 62.6
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 1.6e-26 122.9 124 60.5
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 1.6e-26 122.9 124 60.5
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 1.6e-26 122.9 124 60.5
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 1.6e-26 122.9 124 60.5
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 1.6e-26 122.9 124 60.5
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 1.4e-25 119.8 124 60.5
TAR371G0168 Trochodendron aralioides HOM05D007877 ORTHO05D009957 1.4e-25 119.8 115 63.5
BraSC177t45764Z Brassica rapa HOM05D007877 ORTHO05D009957 4.4e-24 114.8 116 61.2
Solyc04g049250.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.7e-24 114.4 108 62.0
BraSC48t46272Z Brassica rapa HOM05D007877 ORTHO05D009957 9.8e-24 113.6 118 60.2
SHI55214 Sapria himalayana HOM05D007877 ORTHO05D009957 2.2e-23 112.5 124 58.1
Lsat_1_v5_gn_9_49261 Lactuca sativa HOM05D007877 ORTHO05D009957 6.4e-23 110.9 106 64.2
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 8.3e-23 110.5 112 60.7
CsaV3_UNG208000 Cucumis sativus L. HOM05D007877 ORTHO05D009957 2.4e-22 109.0 113 61.1
Lalb_Chr00c29g0408181 Lupinus albus HOM05D007877 ORTHO05D009957 4.1e-22 108.2 106 62.3
Lalb_Chr22g0358751 Lupinus albus HOM05D007877 ORTHO05D009957 4.1e-22 108.2 106 62.3
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 5.4e-22 107.8 94 69.1
arahy.Tifrunner.gnm1.ann1.SK2G41 Arachis hypogaea HOM05D007877 ORTHO05D009957 7.0e-22 107.5 106 62.3
Aqoxy12s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.0e-20 102.1 115 58.3
Aqoxy38s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.0e-20 102.1 115 58.3
TPR.G17000 Trifolium pratense HOM05D007877 ORTHO05D009957 3.0e-20 102.1 65 80.0
Aqoxy1G02979 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.9e-20 101.7 115 58.3
Gohir.A01G022475 Gossypium hirsutum HOM05D007877 ORTHO05D009957 1.1e-19 100.1 61 82.0
MD15G1309600 Malus domestica HOM05D007877 ORTHO05D009957 1.4e-17 93.2 69 66.7
Phvul.005G124700 Phaseolus vulgaris HOM05D007877 ORTHO05D009957 4.0e-17 91.7 58 79.3
LjContig00315g0025322 Lotus japonicus HOM05D007877 ORTHO05D009957 6.8e-17 90.9 123 52.8
Solyc12g035750.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 9.8e-16 87.0 97 51.5
CARHR288300 Cardamine hirsuta HOM05D007877 ORTHO05D009957 1.3e-15 86.7 56 78.6
Psat0s1774g0160 Pisum sativum HOM05D007877 ORTHO05D009957 2.9e-15 85.5 97 56.7
HanXRQChr01g0007101 Helianthus annuus HOM05D007877 ORTHO05D009957 2.4e-14 82.4 69 63.8
Nitab4.5_0004471g0150 Nicotiana tabacum HOM05D007877 ORTHO05D009957 7.0e-14 80.9 93 57.0
SEGI_25147 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 7.0e-14 80.9 105 49.5
EL10Ac8g19721 Beta vulgaris HOM05D007877 ORTHO05D009957 2.0e-13 79.3 65 66.2
SEGI_02417 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 6.0e-13 77.8 110 48.2
PSO384G0556 Papaver somniferum HOM05D007877 ORTHO05D009957 7.8e-13 77.4 65 61.5
PSO541G3164 Papaver somniferum HOM05D007877 ORTHO05D009957 1.7e-12 76.3 65 58.5
Nitab4.5_0009703g0110 Nicotiana tabacum HOM05D007877 ORTHO05D009957 2.3e-12 75.9 123 46.3
CAN.G628.86 Capsicum annuum HOM05D007877 ORTHO05D009957 3.9e-12 75.1 45 86.7
PSO133G0099 Papaver somniferum HOM05D007877 ORTHO05D009957 8.6e-12 73.9 65 60.0
Nitab4.5_0000010g0230 Nicotiana tabacum HOM05D007877 ORTHO05D009957 4.3e-11 71.6 47 78.7
unitig_87.g27972 Utricularia gibba HOM05D007877 ORTHO05D009957 4.3e-11 71.6 92 54.3
Solyc10g062070.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.6e-11 71.2 88 53.4
RhsimMtG0001700 Rhododendron simsii HOM05D007877 ORTHO05D009957 2.1e-10 69.3 88 53.4
RhsimMtG0004900 Rhododendron simsii HOM05D007877 ORTHO05D009957 2.1e-10 69.3 88 53.4
AUR62026822 Chenopodium quinoa HOM05D000743 ORTHO05D000580 3.1e-09 65.5 90 51.1
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 3.1e-09 65.5 88 52.3
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 3.1e-09 65.5 88 52.3
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 4.0e-09 65.1 64 57.8
BraSC77t46652Z Brassica rapa HOM05D007877 ORTHO05D009957 2.6e-08 62.4 44 72.7
Nitab4.5_0000172g2240 Nicotiana tabacum HOM05D007877 ORTHO05D009957 4.9e-07 58.2 32 90.6


User provided reference genes

Program Settings