Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g023960.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 9.0e-50 199.9 98 100.0
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.3e-36 154.5 88 86.4
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.3e-36 154.5 88 86.4
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.3e-36 154.5 88 86.4
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 1.8e-34 149.1 93 79.6
Gohir.A01G022475 Gossypium hirsutum HOM05D007877 ORTHO05D009957 5.5e-31 137.5 95 75.8
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 5.7e-28 127.5 82 75.6
CsaV3_UNG208000 Cucumis sativus L. HOM05D007877 ORTHO05D009957 7.4e-28 127.1 86 72.1
LjContig00315g0025322 Lotus japonicus HOM05D007877 ORTHO05D009957 1.5e-25 119.4 74 77.0
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 3.5e-25 118.2 87 67.8
TPR.G17000 Trifolium pratense HOM05D007877 ORTHO05D009957 1.3e-24 116.3 74 75.7
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 2.2e-24 115.5 71 78.9
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 2.9e-24 115.2 82 73.2
Lalb_Chr00c29g0408181 Lupinus albus HOM05D007877 ORTHO05D009957 6.5e-24 114.0 74 74.3
Lalb_Chr22g0358751 Lupinus albus HOM05D007877 ORTHO05D009957 6.5e-24 114.0 74 74.3
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 1.9e-23 112.5 87 65.5
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 7.2e-23 110.5 81 66.7
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 4.0e-21 104.8 73 69.9
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 4.0e-21 104.8 73 69.9
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 4.0e-21 104.8 73 69.9
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 4.0e-21 104.8 73 69.9
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 4.0e-21 104.8 73 69.9
Ca_26709_v3 Cicer arietinum L. HOM05D010881 ORTHO05D026827 9.1e-18 93.6 61 73.8
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 5.9e-17 90.9 66 68.2
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 5.9e-17 90.9 66 68.2
AUR62043917 Chenopodium quinoa HOM05D000743 ORTHO05D000580 5.9e-17 90.9 66 68.2
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 2.9e-16 88.6 62 71.0
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 2.9e-16 88.6 65 69.2
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 2.9e-16 88.6 65 69.2
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 1.1e-15 86.7 57 73.7
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 1.2e-14 83.2 49 79.6
Nitab4.5_0000172g2240 Nicotiana tabacum HOM05D007877 ORTHO05D009957 1.4e-13 79.7 49 75.5
Thhalv10015628m.g Eutrema salsugineum HOM05D007877 ORTHO05D009957 1.5e-12 76.3 62 61.3
PSO133G0099 Papaver somniferum HOM05D007877 ORTHO05D009957 7.5e-12 73.9 65 55.4
PSO541G3164 Papaver somniferum HOM05D007877 ORTHO05D009957 9.8e-12 73.6 71 52.1
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.7e-11 72.8 43 83.7
Solyc10g062060.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 6.3e-11 70.9 49 75.5
PSO384G0556 Papaver somniferum HOM05D007877 ORTHO05D009957 1.1e-10 70.1 71 50.7
SHI24736 Sapria himalayana HOM05D007877 ORTHO05D009957 5.4e-10 67.8 49 67.3
SHI48166 Sapria himalayana HOM05D007877 ORTHO05D009957 1.5e-07 59.7 44 63.6
SHI32359 Sapria himalayana HOM05D007877 ORTHO05D009957 9.4e-07 57.0 59 55.9
Phvul.005G124700 Phaseolus vulgaris HOM05D007877 ORTHO05D009957 2.7e-06 55.5 40 70.0


User provided reference genes

Program Settings