Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g023844.1 Solanum lycopersicum HOM05D007908 ORTHO05D009653 3.0e-86 322.0 185 100.0
PGSC0003DMG400045810 Solanum tuberosum HOM05D007908 ORTHO05D009653 3.8e-57 225.3 159 84.9
CAN.G680.8 Capsicum annuum HOM05D007908 ORTHO05D009653 3.4e-42 175.6 159 72.3
CAN.G183.8 Capsicum annuum HOM05D007908 ORTHO05D009653 1.2e-39 167.2 141 66.7
CAN.G680.6 Capsicum annuum HOM05D007908 ORTHO05D009653 3.9e-38 162.2 141 75.2
CAN.G162.44 Capsicum annuum HOM05D007908 ORTHO05D009653 1.3e-36 157.1 141 74.5
CAN.G243.9 Capsicum annuum HOM05D007908 ORTHO05D009653 7.4e-29 131.3 108 69.4
Nitab4.5_0009568g0020 Nicotiana tabacum HOM05D007908 ORTHO05D009653 2.7e-23 112.8 108 60.2
Sopen07g019900 Solanum pennellii HOM05D007908 ORTHO05D009653 1.4e-19 100.5 65 80.0
Nitab4.5_0009267g0050 Nicotiana tabacum HOM05D007908 ORTHO05D009653 5.3e-19 98.6 66 77.3
CAN.G4.42 Capsicum annuum HOM05D007908 ORTHO05D000001 1.0e-17 94.4 121 43.8
Solyc07g039660.1 Solanum lycopersicum HOM05D007908 ORTHO05D009653 6.5e-17 91.7 88 61.4
CAN.G541.33 Capsicum annuum HOM05D007908 ORTHO05D009653 3.0e-14 82.8 120 40.8
CAN.G765.6 Capsicum annuum HOM05D000287 ORTHO05D009653 9.8e-13 77.8 109 39.4
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 9.8e-13 77.8 95 42.1
PGSC0003DMG400019370 Solanum tuberosum HOM05D000046 ORTHO05D000195 1.7e-12 77.0 107 43.0
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.2e-12 76.6 105 36.2
TWI15G0389 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 2.8e-12 76.3 117 35.0
TWI18G0422 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 2.8e-12 76.3 117 35.9
TWI73G0060 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 2.8e-12 76.3 117 35.0
TWI38G1015 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 3.7e-12 75.9 117 35.0
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 4.8e-12 75.5 112 37.5
Rhsim13G0148200 Rhododendron simsii HOM05D007908 ORTHO05D009653 8.3e-12 74.7 105 35.2
RhsimUnG0157400 Rhododendron simsii HOM05D007908 ORTHO05D009653 8.3e-12 74.7 105 35.2
TWI77G1008 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 8.3e-12 74.7 117 34.2
CiPaw.07G046700 Carya illinoinensis HOM05D007908 ORTHO05D009653 1.8e-11 73.6 115 31.3
PSO063G3207 Papaver somniferum HOM05D007908 ORTHO05D009653 1.8e-11 73.6 119 37.0
CiPaw.14G112700 Carya illinoinensis HOM05D007908 ORTHO05D009653 3.1e-11 72.8 115 32.2
CAN.G524.32 Capsicum annuum HOM05D007908 ORTHO05D003292 7.0e-11 71.6 104 41.3
Hma1.2p1_1137F.1_g260710 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 9.1e-11 71.2 92 41.3
CAN.G647.27 Capsicum annuum HOM05D007908 ORTHO05D009653 1.2e-10 70.9 117 40.2
CiPaw.01G307800 Carya illinoinensis HOM05D007908 ORTHO05D009653 2.7e-10 69.7 111 35.1
CiPaw.04G138200 Carya illinoinensis HOM05D007908 ORTHO05D009653 3.5e-10 69.3 115 36.5
Potri.004G133001 Populus trichocarpa HOM05D007908 ORTHO05D009653 1.7e-09 67.0 118 34.7
Rhsim11G0061100 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.7e-09 67.0 122 35.2
Rhsim11G0062800 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.7e-09 67.0 122 35.2
CiPaw.12G035000 Carya illinoinensis HOM05D007908 ORTHO05D009653 2.3e-09 66.6 111 35.1
Rhsim05G0128700 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.3e-09 66.6 122 35.2
Hma1.2p1_0362F.1_g136380 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 2.9e-09 66.2 120 31.7
Potri.006G109250 Populus trichocarpa HOM05D007908 ORTHO05D009653 2.9e-09 66.2 118 33.9
Hma1.2p1_1664F.1_g296430 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 6.5e-09 65.1 120 31.7
Hma1.2p1_3592F.1_g336930 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 6.5e-09 65.1 120 31.7
TWI18G0694 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 5.5e-08 62.0 75 38.7
PSO210G6349 Papaver somniferum HOM05D007908 ORTHO05D009653 9.5e-08 61.2 88 42.0
PSO339G2863 Papaver somniferum HOM05D007908 ORTHO05D009653 9.5e-08 61.2 88 42.0
RhsimUnG0057000 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.6e-07 60.5 98 32.7
Ciclev10003571m.g Citrus clementina HOM05D007908 ORTHO05D009653 2.1e-07 60.1 110 30.0
Nn2g14544 Nelumbo nucifera HOM05D007908 ORTHO05D009653 2.1e-07 60.1 119 28.6
Ca_03884_v3 Cicer arietinum L. HOM05D007908 ORTHO05D009653 3.6e-07 59.3 94 35.1
PSO210G6560 Papaver somniferum HOM05D007908 ORTHO05D009653 4.7e-07 58.9 88 40.9
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 4.7e-07 58.9 102 34.3
TPR.G9895 Trifolium pratense HOM05D007908 ORTHO05D009653 1.0e-06 57.8 75 41.3
Ciclev10010619m.g Citrus clementina HOM05D007908 ORTHO05D009653 1.4e-06 57.4 75 36.0
Rhsim04G0131100 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.8e-06 57.0 75 40.0
CAN.G976.5 Capsicum annuum HOM05D061529 ORTHO05D031104 2.3e-06 56.6 76 35.5
Manes.14G134321 Manihot esculenta HOM05D007230 ORTHO05D004756 3.0e-06 56.2 128 32.0
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 3.0e-06 56.2 104 39.4
PSO675G0495 Papaver somniferum HOM05D007230 ORTHO05D004756 6.8e-06 55.1 105 38.1
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 6.8e-06 55.1 98 37.8


User provided reference genes

Program Settings