Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g021530.3 Solanum lycopersicum HOM05D025699 ORTHO05D026176 3.0e-76 288.5 153 100.0
Sopen05g017920 Solanum pennellii HOM05D025699 ORTHO05D026176 8.6e-31 137.5 83 85.5
Sopen07g009800 Solanum pennellii HOM05D025699 ORTHO05D026176 1.3e-23 113.6 111 61.3
Solyc03g150123.1 Solanum lycopersicum HOM05D004682 ORTHO05D026176 4.1e-17 92.0 60 85.0
PGSC0003DMG401015901 Solanum tuberosum HOM05D004682 ORTHO05D006197 4.7e-13 78.6 87 58.6
Solyc05g026510.4 Solanum lycopersicum HOM05D004682 ORTHO05D006197 8.1e-13 77.8 87 57.5
Sopen05g022990 Solanum pennellii HOM05D004682 ORTHO05D006197 1.8e-12 76.6 87 56.3
CAN.G13.21 Capsicum annuum HOM05D004682 ORTHO05D006197 2.6e-11 72.8 87 56.3
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 5.8e-11 71.6 87 54.0
Nitab4.5_0000282g0030 Nicotiana tabacum HOM05D004682 ORTHO05D006197 5.8e-11 71.6 88 55.7
Peaxi162Scf00159g01650 Petunia axillaris HOM05D004682 ORTHO05D006197 7.6e-11 71.2 84 52.4
vmacro02515 Vaccinium macrocarpon HOM05D004682 ORTHO05D006197 6.4e-10 68.2 87 48.3
Actinidia00705 Actinidia chinensis HOM05D004682 ORTHO05D006197 1.4e-09 67.0 82 52.4
CSS0044691 Camellia sinensis var. sinensis HOM05D004682 ORTHO05D006197 3.2e-09 65.9 82 51.2
Atru.chr5.1294 Acer truncatum HOM05D004682 ORTHO05D006197 4.1e-09 65.5 142 36.6
Rhsim13G0018300 Rhododendron simsii HOM05D004682 ORTHO05D006197 5.4e-09 65.1 85 47.1
GSVIVG01011020001 Vitis vinifera HOM05D004682 ORTHO05D006197 7.1e-09 64.7 96 43.8
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 1.6e-08 63.5 80 51.2
Hma1.2p1_0399F.1_g144320 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 1.6e-08 63.5 96 42.7
Hma1.2p1_0399F.1_g144330 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 1.6e-08 63.5 96 42.7
Hma1.2p1_1049F.1_g251880 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 1.6e-08 63.5 81 46.9
CANSAT25G1381 Cannabis sativa HOM05D004682 ORTHO05D006197 2.7e-08 62.8 82 43.9
Lsat_1_v5_gn_9_5121 Lactuca sativa HOM05D004682 ORTHO05D006197 4.6e-08 62.0 80 47.5
HanXRQChr10g0283031 Helianthus annuus HOM05D004682 ORTHO05D006197 7.8e-08 61.2 98 41.8
TWI59G0906 Tripterygium wilfordii HOM05D004682 ORTHO05D006197 1.3e-07 60.5 79 48.1
Migut.D00237 Erythranthe guttata HOM05D004682 ORTHO05D006197 1.7e-07 60.1 96 39.6
CiPaw.07G098500 Carya illinoinensis HOM05D004682 ORTHO05D006197 3.0e-07 59.3 82 45.1
Potri.002G230800 Populus trichocarpa HOM05D004682 ORTHO05D006197 3.0e-07 59.3 91 44.0
Potri.014G151400 Populus trichocarpa HOM05D004682 ORTHO05D006197 3.9e-07 58.9 87 46.0
PGR044G1334 Punica granatum HOM05D004682 ORTHO05D006197 3.9e-07 58.9 96 42.7
Cpa.g.sc9.149 Carica papaya HOM05D004682 ORTHO05D006197 5.1e-07 58.5 83 45.8
Sed0020737 Sechium edule HOM05D004682 ORTHO05D006197 5.1e-07 58.5 84 44.0
Duzib138G0788 Durio zibethinus HOM05D004682 ORTHO05D006197 6.6e-07 58.2 78 48.7
Nn3g21239 Nelumbo nucifera HOM05D004682 ORTHO05D006197 6.6e-07 58.2 79 46.8
EL10Ac1g01562 Beta vulgaris HOM05D004682 ORTHO05D006197 8.6e-07 57.8 80 43.8
Manes.01G212500 Manihot esculenta HOM05D004682 ORTHO05D006197 8.6e-07 57.8 82 46.3
Psat3g025520 Pisum sativum HOM05D004682 ORTHO05D006197 1.1e-06 57.4 79 44.3
QL12p023612 Quercus lobata HOM05D004682 ORTHO05D006197 1.1e-06 57.4 82 43.9
SalBow3G2371 Salvia bowleyana HOM05D004682 ORTHO05D006197 1.1e-06 57.4 96 37.5
TPR.G32282 Trifolium pratense HOM05D004682 ORTHO05D006197 1.1e-06 57.4 79 44.3
TAR633G2734 Trochodendron aralioides HOM05D004682 ORTHO05D006197 1.1e-06 57.4 96 39.6
ECA247G2915 Erigeron canadensis HOM05D004682 ORTHO05D006197 1.5e-06 57.0 79 43.0
Prupe.8G250900 Prunus persica HOM05D004682 ORTHO05D006197 1.5e-06 57.0 81 45.7
unitig_22.g5252 Utricularia gibba HOM05D004682 ORTHO05D006197 1.5e-06 57.0 84 41.7
Phvul.001G201200 Phaseolus vulgaris HOM05D004682 ORTHO05D006197 1.9e-06 56.6 97 40.2
Sabra02G0176000 Salix brachista HOM05D004682 ORTHO05D006197 1.9e-06 56.6 91 42.9
Thecc.01G288600 Theobroma cacao HOM05D004682 ORTHO05D006197 1.9e-06 56.6 78 48.7
Aqoxy2G03153 Aquilegia oxysepala HOM05D004682 ORTHO05D006197 2.5e-06 56.2 78 43.6
Ciclev10018593m.g Citrus clementina HOM05D004682 ORTHO05D006197 2.5e-06 56.2 99 40.4
DCAR_018370 Daucus carota HOM05D004682 ORTHO05D006197 2.5e-06 56.2 82 43.9
AUR62026692 Chenopodium quinoa HOM05D004682 ORTHO05D006197 3.3e-06 55.8 80 42.5
Haze_04797 Corylus avellana HOM05D004682 ORTHO05D006197 3.3e-06 55.8 83 44.6
MELO3C015235.2 Cucumis melo HOM05D004682 ORTHO05D006197 3.3e-06 55.8 82 41.5
CsaV3_1G038120 Cucumis sativus L. HOM05D004682 ORTHO05D006197 3.3e-06 55.8 82 41.5
Glyma.03G207600 Glycine max HOM05D004682 ORTHO05D006197 3.3e-06 55.8 79 44.3
QL12p023658 Quercus lobata HOM05D004682 ORTHO05D006197 3.3e-06 55.8 82 43.9
AUR62013599 Chenopodium quinoa HOM05D004682 ORTHO05D006197 4.3e-06 55.5 80 42.5
Medtr3g050420 Medicago truncatula HOM05D004682 ORTHO05D006197 4.3e-06 55.5 79 43.0
PSO407G0071 Papaver somniferum HOM05D004682 ORTHO05D006197 4.3e-06 55.5 96 38.5
Sc17g0003630 Simmondsia chinensis HOM05D004682 ORTHO05D006197 4.3e-06 55.5 98 43.9
PGSC0003DMG400006683 Solanum tuberosum HOM05D004682 ORTHO05D006197 4.3e-06 55.5 48 62.5
COL.COLO4_08044 Corchorus olitorius HOM05D004682 ORTHO05D006197 5.6e-06 55.1 74 50.0
arahy.Tifrunner.gnm1.ann1.BJ6WT1 Arachis hypogaea HOM05D004682 ORTHO05D006197 7.3e-06 54.7 79 44.3
arahy.Tifrunner.gnm1.ann1.SJK0SQ Arachis hypogaea HOM05D004682 ORTHO05D006197 7.3e-06 54.7 79 44.3
Ca_09103_v3 Cicer arietinum L. HOM05D004682 ORTHO05D006197 7.3e-06 54.7 79 43.0
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 9.6e-06 54.3 83 44.6
PSO170G5080 Papaver somniferum HOM05D004682 ORTHO05D006197 9.6e-06 54.3 96 38.5
SGA_v2.0_scaffold1G00427 Striga asiatica HOM05D004682 ORTHO05D006197 9.6e-06 54.3 96 38.5
HPP92_027340 Vanilla planifolia HOM05D004682 ORTHO05D006197 9.6e-06 54.3 99 38.4


User provided reference genes

Program Settings