Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g021200.1 Solanum lycopersicum HOM05D004181 ORTHO05D005610 1.7e-64 249.2 125 100.0
Solyc08g013940.3 Solanum lycopersicum HOM05D004181 ORTHO05D005610 1.1e-31 140.2 121 63.6
Sopen08g004800 Solanum pennellii HOM05D004181 ORTHO05D005610 1.1e-31 140.2 121 63.6
Peaxi162Scf00075g01553 Petunia axillaris HOM05D004181 ORTHO05D005610 9.2e-31 137.1 121 62.0
CAN.G2005.1 Capsicum annuum HOM05D004181 ORTHO05D005610 1.3e-29 133.3 121 62.0
Peaxi162Scf00058g01114 Petunia axillaris HOM05D004181 ORTHO05D005610 8.9e-26 120.6 120 57.5
Duzib151G0672 Durio zibethinus HOM05D004181 ORTHO05D005610 2.0e-25 119.4 123 54.5
Gohir.A10G101825 Gossypium hirsutum HOM05D004181 ORTHO05D005610 4.4e-25 118.2 123 53.7
TAR633G0339 Trochodendron aralioides HOM05D004181 ORTHO05D005610 5.8e-25 117.9 123 55.3
COL.COLO4_13939 Corchorus olitorius HOM05D004181 ORTHO05D005610 7.5e-25 117.5 123 53.7
Gohir.D10G165800 Gossypium hirsutum HOM05D004181 ORTHO05D005610 7.5e-25 117.5 123 53.7
GSVIVG01017819001 Vitis vinifera HOM05D004181 ORTHO05D005610 7.5e-25 117.5 123 54.5
CSS0036329 Camellia sinensis var. sinensis HOM05D004181 ORTHO05D005610 9.8e-25 117.1 121 56.2
Dinv44435 Davidia involucrata HOM05D004181 ORTHO05D005610 1.3e-24 116.7 123 55.3
Lj6C668T4 Lonicera japonica HOM05D004181 ORTHO05D005610 1.3e-24 116.7 123 55.3
CSS0009092 Camellia sinensis var. sinensis HOM05D004181 ORTHO05D005610 1.7e-24 116.3 123 55.3
Thecc.04G276100 Theobroma cacao HOM05D004181 ORTHO05D005610 2.2e-24 115.9 123 52.8
Gorai.011G185300 Gossypium raimondii HOM05D004181 ORTHO05D005610 6.4e-24 114.4 123 52.8
PGSC0003DMG400016756 Solanum tuberosum HOM05D004181 ORTHO05D005610 6.4e-24 114.4 122 54.1
MSTRG.21818 Avicennia marina HOM05D004181 ORTHO05D005610 8.3e-24 114.0 123 51.2
CANSAT78G2156 Cannabis sativa HOM05D004181 ORTHO05D005610 8.3e-24 114.0 140 47.1
CiPaw.01G154000 Carya illinoinensis HOM05D004181 ORTHO05D005610 1.1e-23 113.6 123 52.0
Ciclev10004155m.g Citrus clementina HOM05D004181 ORTHO05D005610 1.9e-23 112.8 123 53.7
DCAR_024617 Daucus carota HOM05D004181 ORTHO05D005610 1.9e-23 112.8 123 53.7
Cpa.g.sc16.105 Carica papaya HOM05D004181 ORTHO05D005610 3.2e-23 112.1 123 54.5
SGA_v2.0_scaffold89G27558 Striga asiatica HOM05D004181 ORTHO05D005610 4.1e-23 111.7 123 51.2
Migut.N00126 Erythranthe guttata HOM05D004181 ORTHO05D005610 1.6e-22 109.8 123 50.4
TWI73G0666 Tripterygium wilfordii HOM05D004181 ORTHO05D005610 1.6e-22 109.8 123 52.0
TWI09G1497 Tripterygium wilfordii HOM05D004181 ORTHO05D005610 4.6e-22 108.2 122 51.6
vmacro08213 Vaccinium macrocarpon HOM05D004181 ORTHO05D005610 6.0e-22 107.8 123 53.7
QL06p007241 Quercus lobata HOM05D004181 ORTHO05D005610 7.8e-22 107.5 123 49.6
SalBow5G0241 Salvia bowleyana HOM05D004181 ORTHO05D005610 1.3e-21 106.7 123 49.6
SalBow5G5345 Salvia bowleyana HOM05D004181 ORTHO05D005610 1.3e-21 106.7 123 49.6
Medtr2g020380 Medicago truncatula HOM05D004181 ORTHO05D005610 1.7e-21 106.3 123 48.8
Phvul.006G160500 Phaseolus vulgaris HOM05D004181 ORTHO05D005610 1.7e-21 106.3 123 50.4
Cfa015503 Carpinus fangiana HOM05D004181 ORTHO05D005610 3.0e-21 105.5 123 48.8
Cc03_g12380 Coffea canephora HOM05D004181 ORTHO05D005610 3.0e-21 105.5 123 50.4
LjContig00389g0007799 Lotus japonicus HOM05D004181 ORTHO05D005610 3.0e-21 105.5 123 49.6
Nn3g21283 Nelumbo nucifera HOM05D004181 ORTHO05D005610 3.0e-21 105.5 121 51.2
Psat1g186920 Pisum sativum HOM05D004181 ORTHO05D005610 3.9e-21 105.1 123 48.8
FvH4_4g17050 Fragaria vesca HOM05D004181 ORTHO05D005610 5.0e-21 104.8 123 48.8
FAN07G0512 Fragaria x ananassa HOM05D004181 ORTHO05D005610 5.0e-21 104.8 123 48.8
FAN12G1830 Fragaria x ananassa HOM05D004181 ORTHO05D005610 5.0e-21 104.8 123 48.8
FAN12G4244 Fragaria x ananassa HOM05D004181 ORTHO05D005610 5.0e-21 104.8 123 48.8
Gohir.A02G045700 Gossypium hirsutum HOM05D004181 ORTHO05D005610 5.0e-21 104.8 123 48.8
Gohir.D02G051700 Gossypium hirsutum HOM05D004181 ORTHO05D005610 5.0e-21 104.8 123 48.8
Gorai.005G057000 Gossypium raimondii HOM05D004181 ORTHO05D005610 5.0e-21 104.8 123 48.8
Lalb_Chr15g0087091 Lupinus albus HOM05D004181 ORTHO05D005610 5.0e-21 104.8 121 49.6
A03p09050 Brassica napus HOM05D004181 ORTHO05D005610 6.6e-21 104.4 121 52.1
BraA03t10229Z Brassica rapa HOM05D004181 ORTHO05D005610 6.6e-21 104.4 121 52.1
QL12p038326 Quercus lobata HOM05D004181 ORTHO05D005610 6.6e-21 104.4 123 48.8
VMungo0540G0214 Vigna mungo HOM05D004181 ORTHO05D005610 6.6e-21 104.4 123 48.8
Haze_01049 Corylus avellana HOM05D004181 ORTHO05D005610 8.6e-21 104.0 123 48.0
Manes.03G190400 Manihot esculenta HOM05D004181 ORTHO05D005610 8.6e-21 104.0 123 50.4
Sabra08G0148900 Salix brachista HOM05D004181 ORTHO05D005610 8.6e-21 104.0 123 49.6
Ca_00581_v3 Cicer arietinum L. HOM05D004181 ORTHO05D005610 1.5e-20 103.2 123 47.2
TPR.G1487 Trifolium pratense HOM05D004181 ORTHO05D005610 1.5e-20 103.2 123 48.0
Aqoxy5G00623 Aquilegia oxysepala HOM05D004181 ORTHO05D005610 2.5e-20 102.4 121 50.4
AT5G18700 Arabidopsis thaliana HOM05D004181 ORTHO05D005610 2.5e-20 102.4 121 51.2
C03p10540 Brassica napus HOM05D004181 ORTHO05D005610 2.5e-20 102.4 121 51.2
BolC3t13535H Brassica oleracea HOM05D004181 ORTHO05D005610 2.5e-20 102.4 121 51.2
Rhsim04G0215600 Rhododendron simsii HOM05D004181 ORTHO05D005610 2.5e-20 102.4 123 51.2
RcHm_v2.0_Chr4g0420851 Rosa chinensis HOM05D004181 ORTHO05D005610 2.5e-20 102.4 123 48.8
AL6G29980 Arabidopsis lyrata HOM05D004181 ORTHO05D005610 3.3e-20 102.1 121 51.2
CARHR194300 Cardamine hirsuta HOM05D004181 ORTHO05D005610 3.3e-20 102.1 121 51.2
FAN17G2769 Fragaria x ananassa HOM05D004181 ORTHO05D005610 3.3e-20 102.1 123 48.0
Glyma.15G098800 Glycine max HOM05D004181 ORTHO05D005610 3.3e-20 102.1 123 48.8
Potri.010G031800 Populus trichocarpa HOM05D004181 ORTHO05D005610 3.3e-20 102.1 123 48.8
Thhalv10012450m.g Eutrema salsugineum HOM05D004181 ORTHO05D005610 4.3e-20 101.7 121 50.4
Glyma.13G214400 Glycine max HOM05D004181 ORTHO05D005610 4.3e-20 101.7 123 48.8
PSO170G6249 Papaver somniferum HOM05D004181 ORTHO05D005610 4.3e-20 101.7 119 51.3
Carub.0006s1700 Capsella rubella HOM05D004181 ORTHO05D005610 5.6e-20 101.3 121 51.2
MD16G1176300 Malus domestica HOM05D004181 ORTHO05D005610 5.6e-20 101.3 123 49.6
BcaB08g36651 Brassica carinata HOM05D004181 ORTHO05D005610 7.3e-20 100.9 118 51.7
A10p20860 Brassica napus HOM05D004181 ORTHO05D005610 7.3e-20 100.9 118 51.7
BraA10t44151Z Brassica rapa HOM05D004181 ORTHO05D005610 7.3e-20 100.9 118 51.7
Potri.008G195800 Populus trichocarpa HOM05D004181 ORTHO05D005610 7.3e-20 100.9 123 48.8
BcaC04g18651 Brassica carinata HOM05D004181 ORTHO05D005610 9.5e-20 100.5 118 51.7
C09p57750 Brassica napus HOM05D004181 ORTHO05D005610 9.5e-20 100.5 118 51.7
arahy.Tifrunner.gnm1.ann1.6ZP27B Arachis hypogaea HOM05D004181 ORTHO05D005610 1.2e-19 100.1 122 50.0
Prupe.1G143100 Prunus persica HOM05D004181 ORTHO05D005610 1.2e-19 100.1 123 48.0
MD13G1174600 Malus domestica HOM05D004181 ORTHO05D005610 1.6e-19 99.8 123 49.6
Aa31LG11G10920 Aethionema arabicum HOM05D004181 ORTHO05D005610 2.1e-19 99.4 121 50.4
Sed0020769 Sechium edule HOM05D004181 ORTHO05D005610 2.1e-19 99.4 123 48.0
CsaV3_3G014080 Cucumis sativus L. HOM05D004181 ORTHO05D005610 2.8e-19 99.0 123 48.0
Sp6g25640 Schrenkiella parvula HOM05D004181 ORTHO05D005610 2.8e-19 99.0 121 50.4
BolC9t58645H Brassica oleracea HOM05D004181 ORTHO05D005610 3.6e-19 98.6 118 50.8
ClCG05G005760 Citrullus lanatus HOM05D004181 ORTHO05D005610 3.6e-19 98.6 123 48.8
Manes.15G017750 Manihot esculenta HOM05D004181 ORTHO05D005610 4.7e-19 98.2 123 48.0
Sc13g0003670 Simmondsia chinensis HOM05D004181 ORTHO05D005610 4.7e-19 98.2 121 51.2
THA.LOC104820110 Tarenaya hassleriana HOM05D004181 ORTHO05D005610 4.7e-19 98.2 120 50.8
Lsat_1_v5_gn_6_15980 Lactuca sativa HOM05D004181 ORTHO05D005610 6.2e-19 97.8 123 48.8
Lalb_Chr18g0055771 Lupinus albus HOM05D004181 ORTHO05D005610 6.2e-19 97.8 123 48.8
CiPaw.02G087200 Carya illinoinensis HOM05D004181 ORTHO05D005610 3.1e-18 95.5 121 47.1
ECA233G4950 Erigeron canadensis HOM05D004181 ORTHO05D005610 4.0e-18 95.1 123 45.5
Sed0026329 Sechium edule HOM05D004181 ORTHO05D005610 1.2e-17 93.6 123 47.2
ATR0706G144 Amborella trichopoda HOM05D004181 ORTHO05D005610 4.4e-17 91.7 124 46.0
SHI00295 Sapria himalayana HOM05D004181 ORTHO05D005610 4.4e-17 91.7 121 47.9
PGR004G0905 Punica granatum HOM05D004181 ORTHO05D005610 7.5e-17 90.9 118 48.3
Os01g0259400 Oryza sativa ssp. japonica HOM05D004181 ORTHO05D005610 9.8e-17 90.5 122 44.3
Zm00001eb333450 Zea mays HOM05D004181 ORTHO05D005610 1.3e-16 90.1 122 43.4
Eucgr.H03714 Eucalyptus grandis HOM05D004181 ORTHO05D005610 2.9e-16 89.0 125 45.6
HanXRQChr13g0414551 Helianthus annuus HOM05D004181 ORTHO05D005610 2.9e-16 89.0 123 45.5
Hund20614 Selenicereus undatus HOM05D004181 ORTHO05D005610 4.9e-16 88.2 121 43.8
CDE12G0304 Ceratophyllum demersum HOM05D004181 ORTHO05D005610 6.4e-16 87.8 119 42.9
EL10Ac3g06539 Beta vulgaris HOM05D004181 ORTHO05D005610 1.1e-15 87.0 136 41.2
Zm00001eb127880 Zea mays HOM05D004181 ORTHO05D005610 1.9e-15 86.3 124 43.5
HPP92_025279 Vanilla planifolia HOM05D004181 ORTHO05D005610 3.2e-15 85.5 120 46.7
SEGI_19119 Sequoiadendron giganteum HOM05D004181 ORTHO05D005610 2.1e-14 82.8 123 47.2
AUR62040726 Chenopodium quinoa HOM05D004181 ORTHO05D005610 3.9e-13 78.6 121 40.5
Solyc05g023630.1 Solanum lycopersicum HOM05D004181 ORTHO05D005610 3.9e-13 78.6 58 65.5
AUR62040385 Chenopodium quinoa HOM05D004181 ORTHO05D005610 5.1e-13 78.2 121 39.7
AagrBONN_evm.TU.Sc2ySwM_117.2942 Anthoceros agrestis HOM05D004181 ORTHO05D005610 3.6e-11 72.0 119 40.3
Mapoly0072s0051 Marchantia polymorpha HOM05D004181 ORTHO05D005610 6.2e-11 71.2 117 42.7
Rhsim13G0005700 Rhododendron simsii HOM05D004181 ORTHO05D005610 9.9e-09 63.9 61 50.8
Pp3c14_3850 Physcomitrium patens HOM05D004181 ORTHO05D005610 4.1e-07 58.5 115 37.4
SGA_v2.0_scaffold299G47726 Striga asiatica HOM05D004181 ORTHO05D005610 9.2e-07 57.4 102 41.2
Pp3c2_16690 Physcomitrium patens HOM05D004181 ORTHO05D005610 1.6e-06 56.6 115 34.8
MELO3C006602.2 Cucumis melo HOM05D004181 ORTHO05D005610 4.6e-06 55.1 104 38.5


User provided reference genes

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