Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g018860.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.1e-66 255.0 127 100.0
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 3.3e-28 128.6 116 59.5
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 3.3e-28 128.6 116 59.5
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.7e-24 116.3 114 56.1
Solyc10g050400.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.2e-24 115.9 114 54.4
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 5.5e-23 111.3 106 57.5
PGSC0003DMG400039849 Solanum tuberosum HOM05D002907 ORTHO05D005554 2.1e-22 109.4 112 52.7
PGSC0003DMG400042496 Solanum tuberosum HOM05D002907 ORTHO05D005554 6.0e-22 107.8 111 53.2
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.7e-21 104.0 109 54.1
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.3e-20 102.1 102 54.9
Sopen05g016270 Solanum pennellii HOM05D004229 ORTHO05D026150 6.3e-19 97.8 55 90.9
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.2e-16 89.4 116 42.2
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.8e-16 88.6 116 42.2
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.5e-15 85.9 101 46.5
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.5e-15 85.9 112 43.8
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 5.5e-15 84.7 112 43.8
Sopen10g024010 Solanum pennellii HOM05D002907 ORTHO05D005554 9.4e-15 84.0 105 45.7
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 1.2e-14 83.6 117 41.0
Sopen01g015020 Solanum pennellii HOM05D002907 ORTHO05D005554 1.2e-14 83.6 59 72.9
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 1.6e-14 83.2 117 37.6
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 2.1e-14 82.8 116 38.8
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 2.1e-14 82.8 116 38.8
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 2.7e-14 82.4 117 41.0
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 3.0e-13 79.0 108 40.7
Sopen05g018840 Solanum pennellii HOM05D002907 ORTHO05D005554 5.1e-13 78.2 57 71.9
Solyc08g028810.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.8e-13 77.4 105 41.9
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 1.5e-12 76.6 110 42.7
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 1.5e-12 76.6 110 42.7
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.5e-12 76.6 117 37.6
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.3e-12 75.5 110 40.0
CAN.G183.9 Capsicum annuum HOM05D002907 ORTHO05D005554 4.3e-12 75.1 111 39.6
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 4.3e-12 75.1 117 36.8
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 4.3e-12 75.1 117 36.8
Nitab4.5_0000051g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.7e-12 74.7 103 37.9
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 9.7e-12 73.9 111 38.7
Peaxi162Scf00297g00049 Petunia axillaris HOM05D002907 ORTHO05D005554 2.8e-11 72.4 109 36.7
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.1e-10 70.5 113 36.3
Solyc09g150120.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.8e-10 69.7 113 36.3
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 3.1e-10 68.9 117 34.2
Nitab4.5_0000359g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.9e-10 67.8 111 35.1
Sopen04g009160 Solanum pennellii HOM05D045494 ORTHO05D026150 6.9e-10 67.8 56 58.9
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 1.5e-09 66.6 113 36.3
CANSAT56G3687 Cannabis sativa HOM05D002907 ORTHO05D005554 1.5e-09 66.6 110 37.3
CAN.G25.7 Capsicum annuum HOM05D002907 ORTHO05D005554 1.5e-09 66.6 111 34.2
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 2.0e-09 66.2 113 36.3
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.5e-09 65.1 127 35.4
Solyc04g018050.1 Solanum lycopersicum HOM05D045494 ORTHO05D026150 4.5e-09 65.1 56 57.1
Solyc02g014410.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.9e-07 59.7 49 57.1
DCAR_009226 Daucus carota HOM05D000033 ORTHO05D000913 2.5e-07 59.3 112 34.8
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 3.2e-07 58.9 112 34.8
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 4.2e-07 58.5 61 47.5
Solyc10g054270.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 7.2e-07 57.8 100 40.0
CAN.G865.8 Capsicum annuum HOM05D002907 ORTHO05D005554 2.1e-06 56.2 99 37.4
CANSAT78G0666 Cannabis sativa HOM05D002907 ORTHO05D005554 2.7e-06 55.8 108 31.5
CANSAT25G3758 Cannabis sativa HOM05D002907 ORTHO05D005554 3.6e-06 55.5 107 34.6
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 7.9e-06 54.3 57 49.1


User provided reference genes

Program Settings