Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g018800.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 2.6e-36 154.8 77 100.0
Solyc00g500226.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 7.7e-12 73.6 47 78.7
Solyc00g500262.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 7.7e-12 73.6 47 78.7
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 7.7e-12 73.6 47 78.7
Solyc06g074585.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 7.7e-12 73.6 47 78.7
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 7.7e-12 73.6 47 78.7
PGSC0003DMG400010573 Solanum tuberosum HOM05D002965 ORTHO05D010536 7.7e-12 73.6 47 78.7
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-11 71.6 47 74.5
Solyc00g500114.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 5.0e-11 70.9 47 76.6
CAN.G362.38 Capsicum annuum HOM05D002965 ORTHO05D010994 7.2e-10 67.0 47 72.3
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 2.7e-09 65.1 31 93.5
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 1.8e-08 62.4 47 70.2
Sopen11g012750 Solanum pennellii HOM05D002660 ORTHO05D003902 5.1e-08 60.8 43 72.1
Potri.007G062262 Populus trichocarpa HOM05D002965 ORTHO05D010536 6.7e-08 60.5 45 60.0
SabraMtG0009900 Salix brachista HOM05D002965 ORTHO05D010536 6.7e-08 60.5 45 60.0
Eucgr.I01860 Eucalyptus grandis HOM05D002965 ORTHO05D010536 8.8e-08 60.1 45 64.4
BNapus_Darmor_BZH_scaffold_234p00050 Brassica napus HOM05D002965 ORTHO05D010536 3.3e-07 58.2 45 60.0
BolSC28t60357H Brassica oleracea HOM05D002965 ORTHO05D010536 3.3e-07 58.2 45 60.0
BraSC48t46254Z Brassica rapa HOM05D002965 ORTHO05D010536 3.3e-07 58.2 45 60.0
Gohir.D06G053851 Gossypium hirsutum HOM05D002965 ORTHO05D010536 7.4e-07 57.0 45 53.3
Aqoxy3G01134 Aquilegia oxysepala HOM05D002965 ORTHO05D010536 9.7e-07 56.6 45 55.6
PGR028G0005 Punica granatum HOM05D002965 ORTHO05D010536 1.3e-06 56.2 47 57.4
PGR069G0002 Punica granatum HOM05D002965 ORTHO05D010536 1.3e-06 56.2 47 57.4
PGR069G0012 Punica granatum HOM05D002965 ORTHO05D010536 1.3e-06 56.2 47 57.4
PGR069G0018 Punica granatum HOM05D002965 ORTHO05D010536 1.3e-06 56.2 47 57.4
PGR071G0002 Punica granatum HOM05D002965 ORTHO05D010536 1.3e-06 56.2 47 57.4
Gorai.013G137600 Gossypium raimondii HOM05D002965 ORTHO05D010536 1.7e-06 55.8 45 57.8
Thhalv10023135m.g Eutrema salsugineum HOM05D002965 ORTHO05D010536 2.2e-06 55.5 45 55.6
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 2.2e-06 55.5 45 57.8
Hma1.2p1_0290F.1_g114710 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 4.8e-06 54.3 45 60.0
Hma1.2p1_0290F.1_g114715 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 4.8e-06 54.3 45 60.0
CARHR283260 Cardamine hirsuta HOM05D002965 ORTHO05D010536 8.2e-06 53.5 45 53.3


User provided reference genes

Program Settings