Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g016220.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 8.2e-67 256.9 129 100.0
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.7e-61 237.3 128 92.2
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.7e-61 237.3 128 92.2
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.7e-61 237.3 128 92.2
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.7e-61 237.3 128 92.2
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.7e-61 237.3 128 92.2
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 6.7e-61 237.3 128 92.2
Solyc11g021300.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 2.2e-56 222.2 128 86.7
Solyc08g016000.2 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.5e-48 194.1 112 87.5
Nitab4.5_0000172g2280 Nicotiana tabacum HOM05D001070 ORTHO05D010233 4.7e-38 161.4 128 66.4
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 4.5e-33 144.8 128 54.7
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 2.5e-31 139.0 128 53.9
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 3.0e-29 132.1 127 52.0
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 3.7e-27 125.2 130 52.3
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 5.4e-26 121.3 130 50.8
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 5.4e-26 121.3 130 50.8
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 5.4e-26 121.3 130 50.8
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 5.4e-26 121.3 130 50.8
HanXRQChr15g0465501 Helianthus annuus HOM05D001070 ORTHO05D010233 5.4e-26 121.3 130 50.8
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 5.4e-26 121.3 130 50.8
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 5.4e-26 121.3 130 50.8
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.5e-25 118.2 131 51.1
Peaxi162Scf00080g00515 Petunia axillaris HOM05D001070 ORTHO05D010233 4.5e-25 118.2 128 54.7
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 5.9e-25 117.9 69 79.7
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 7.8e-25 117.5 128 52.3
Oeu012762.2 Olea europaea HOM05D001070 ORTHO05D002096 6.6e-24 114.4 96 61.5
Ciclev10014004m.g Citrus clementina HOM05D001070 ORTHO05D010233 5.6e-23 111.3 128 47.7
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.6e-23 111.3 128 47.7
Solyc02g011850.3 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.0e-21 105.1 71 74.6
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 1.5e-20 103.2 130 43.8
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 5.7e-20 101.3 136 45.6
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 4.9e-19 98.2 128 43.0
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 6.4e-19 97.8 96 53.1
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 8.3e-19 97.4 128 40.6
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 8.3e-19 97.4 128 40.6
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 8.3e-19 97.4 128 40.6
Oeu012820.1 Olea europaea HOM05D000533 ORTHO05D002807 1.4e-18 96.7 130 46.2
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.2e-18 95.5 130 43.1
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 4.1e-18 95.1 128 39.8
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 5.4e-18 94.7 130 42.3
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 7.0e-18 94.4 128 41.4
Gohir.A05G323700 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.7e-17 92.4 86 51.2
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 3.5e-17 92.0 127 43.3
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 1.0e-16 90.5 90 51.1
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 1.0e-16 90.5 90 51.1
Lju5009P0T37 Lonicera japonica HOM05D001070 ORTHO05D002096 1.5e-15 86.7 144 38.9
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 2.5e-15 85.9 141 36.9
C07p33490 Brassica napus HOM05D001070 ORTHO05D002096 9.5e-15 84.0 90 45.6
Nitab4.5_0000729g0030 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.6e-14 83.2 55 72.7
HanXRQChr00c0379g0574341 Helianthus annuus HOM05D001070 ORTHO05D002096 2.1e-14 82.8 83 51.8
TAR365G0787 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.4e-13 80.1 79 51.9
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 5.8e-12 74.7 117 38.5
HPP92_028416 Vanilla planifolia HOM05D041394 ORTHO05D002096 8.3e-11 70.9 114 36.8
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 1.2e-09 67.0 102 38.2
Gohir.D01G134260 Gossypium hirsutum HOM05D001070 ORTHO05D010233 7.8e-09 64.3 82 41.5
Peaxi162Scf00080g00522 Petunia axillaris HOM05D001070 ORTHO05D022991 1.0e-08 63.9 55 60.0
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 2.5e-07 59.3 55 54.5
Glyma.02G177300 Glycine max HOM05D001070 ORTHO05D010233 2.1e-06 56.2 71 39.4


User provided reference genes

Program Settings