Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g016130.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 1.0e-30 136.3 65 100.0
AL2G21390 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
BolSC29t60457H Brassica oleracea HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
BraA06t25429Z Brassica rapa HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
BraSC151t45710Z Brassica rapa HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
BraSC179t45799Z Brassica rapa HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Ciclev10004110m.g Citrus clementina HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Ciclev10010876m.g Citrus clementina HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Ciclev10027634m.g Citrus clementina HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Ciclev10027655m.g Citrus clementina HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Ciclev10030462m.g Citrus clementina HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Ciclev10030468m.g Citrus clementina HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Migut.D01425 Erythranthe guttata HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Gohir.A10G100300 Gossypium hirsutum HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
HanXRQChr16g0522541 Helianthus annuus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Lalb_Chr23g0274721 Lupinus albus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Prupe.1G271000 Prunus persica HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund19306 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Solyc00g500145.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 9.0e-27 123.2 63 90.5
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 9.0e-27 123.2 63 90.5
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 1.2e-26 122.9 63 88.9
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 1.2e-26 122.9 63 90.5
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 1.2e-26 122.9 63 90.5
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 1.2e-26 122.9 63 90.5
C04p63050 Brassica napus HOM05D000388 ORTHO05D004227 1.5e-26 122.5 63 90.5
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 2.6e-26 121.7 63 88.9
BolSC29t60580H Brassica oleracea HOM05D000388 ORTHO05D004227 2.6e-26 121.7 64 87.5
BolSC45t60945H Brassica oleracea HOM05D000388 ORTHO05D004227 2.6e-26 121.7 64 87.5
BraSC140t45579Z Brassica rapa HOM05D000388 ORTHO05D004227 2.6e-26 121.7 62 90.3
CAN.G1693.3 Capsicum annuum HOM05D000388 ORTHO05D004227 2.6e-26 121.7 63 88.9
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 2.6e-26 121.7 63 88.9
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 2.6e-26 121.7 63 88.9
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 2.6e-26 121.7 63 88.9
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 2.6e-26 121.7 63 88.9
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 3.4e-26 121.3 63 88.9
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 3.4e-26 121.3 63 88.9
BolC7t41724H Brassica oleracea HOM05D000388 ORTHO05D004227 4.5e-26 120.9 63 88.9
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 4.5e-26 120.9 63 88.9
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 9.9e-26 119.8 61 90.2
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 9.9e-26 119.8 61 90.2
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 9.9e-26 119.8 61 90.2
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 9.9e-26 119.8 61 90.2
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 9.9e-26 119.8 61 90.2
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 9.9e-26 119.8 61 90.2
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 9.9e-26 119.8 61 90.2
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 9.9e-26 119.8 61 90.2
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 9.9e-26 119.8 61 90.2
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 9.9e-26 119.8 61 90.2
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.7e-25 119.0 63 87.3
BolSC47t61105H Brassica oleracea HOM05D000388 ORTHO05D004227 2.2e-25 118.6 63 87.3
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 2.9e-25 118.2 60 90.0
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 2.9e-25 118.2 60 90.0
Glyma.09G178600 Glycine max HOM05D000388 ORTHO05D004227 3.8e-25 117.9 63 85.7
GSVIVG01016018001 Vitis vinifera HOM05D000388 ORTHO05D004227 4.9e-25 117.5 63 85.7
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 6.4e-25 117.1 63 87.3
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 6.4e-25 117.1 63 85.7
Gohir.A07G163609 Gossypium hirsutum HOM05D000388 ORTHO05D004227 8.4e-25 116.7 63 87.3
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 1.1e-24 116.3 63 87.3
BolSC49t61190H Brassica oleracea HOM05D000388 ORTHO05D004227 1.9e-24 115.5 62 87.1
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 1.9e-24 115.5 61 88.5
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 7.1e-24 113.6 58 87.9
Gorai.011G148900 Gossypium raimondii HOM05D000388 ORTHO05D004227 2.7e-23 111.7 59 88.1
Gorai.010G171400 Gossypium raimondii HOM05D000388 ORTHO05D004227 3.9e-22 107.8 58 86.2
Gohir.D06G147066 Gossypium hirsutum HOM05D000388 ORTHO05D004227 8.7e-22 106.7 58 84.5
Nitab4.5_0010321g0020 Nicotiana tabacum HOM05D000388 ORTHO05D004227 8.7e-22 106.7 56 87.5
Glyma.01G201600 Glycine max HOM05D000388 ORTHO05D004227 3.3e-21 104.8 63 77.8
Oeu062832.1 Olea europaea HOM05D000388 ORTHO05D004227 4.3e-21 104.4 72 73.6
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 9.6e-21 103.2 52 90.4
arahy.Tifrunner.gnm1.ann1.9ACV62 Arachis hypogaea HOM05D000388 ORTHO05D004227 2.8e-20 101.7 63 79.4
arahy.Tifrunner.gnm1.ann1.HC26ZW Arachis hypogaea HOM05D000388 ORTHO05D004227 2.8e-20 101.7 63 79.4
BolC9t56935H Brassica oleracea HOM05D000388 ORTHO05D004227 1.8e-19 99.0 50 92.0
CAN.G678.5 Capsicum annuum HOM05D000388 ORTHO05D004227 3.1e-19 98.2 54 88.9
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 3.4e-18 94.7 63 73.0
EL10Ac1g01463 Beta vulgaris HOM05D000388 ORTHO05D004227 3.4e-18 94.7 49 89.8
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 3.4e-18 94.7 63 73.0
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 3.4e-18 94.7 63 73.0
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 3.4e-18 94.7 63 73.0
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 3.4e-18 94.7 63 73.0
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 3.4e-18 94.7 63 73.0
BraSC25t45839Z Brassica rapa HOM05D000388 ORTHO05D004227 7.6e-18 93.6 65 70.8
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 1.7e-17 92.4 46 91.3
RcHm_v2.0_Chr5g0077071 Rosa chinensis HOM05D000388 ORTHO05D004227 4.9e-17 90.9 64 70.3
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 1.9e-16 89.0 44 90.9
Potri.003G065133 Populus trichocarpa HOM05D000388 ORTHO05D004227 1.9e-16 89.0 44 90.9
Migut.D01351 Erythranthe guttata HOM05D000388 ORTHO05D004227 4.2e-16 87.8 57 73.7
RcHm_v2.0_Chr5g0077061 Rosa chinensis HOM05D000388 ORTHO05D004227 5.5e-16 87.4 54 77.8
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 7.9e-15 83.6 62 66.1
Lsat_1_v5_gn_8_5941 Lactuca sativa HOM05D000388 ORTHO05D004227 1.8e-14 82.4 44 84.1
Gohir.A03G019600 Gossypium hirsutum HOM05D000388 ORTHO05D004227 5.1e-14 80.9 40 92.5
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 5.1e-14 80.9 43 86.0
Lalb_Chr15g0080681 Lupinus albus HOM05D000388 ORTHO05D004227 8.7e-14 80.1 40 90.0
Phvul.001G146500 Phaseolus vulgaris HOM05D000388 ORTHO05D004227 4.3e-13 77.8 63 63.5
Peaxi162Scf00284g01052 Petunia axillaris HOM05D000388 ORTHO05D004227 2.1e-12 75.5 40 85.0
Lalb_Chr20g0115471 Lupinus albus HOM05D000388 ORTHO05D004227 1.1e-11 73.2 55 63.6
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 1.1e-11 73.2 57 57.9
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 9.0e-11 70.1 36 88.9
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 3.4e-10 68.2 44 70.5
GSVIVG01008500001 Vitis vinifera HOM05D000388 ORTHO05D004227 1.7e-09 65.9 53 58.5
Lsat_1_v5_gn_8_105481 Lactuca sativa HOM05D000388 ORTHO05D004227 3.8e-09 64.7 43 69.8
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 1.4e-08 62.8 63 54.0
Gohir.A06G120306 Gossypium hirsutum HOM05D000388 ORTHO05D004227 3.2e-08 61.6 32 84.4
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 9.3e-08 60.1 61 52.5
Lsat_1_v5_gn_2_5581 Lactuca sativa HOM05D000388 ORTHO05D004227 8.7e-06 53.5 63 47.6


User provided reference genes

Program Settings