Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g015180.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.7e-64 248.4 118 100.0
Solyc05g010735.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-51 203.8 157 67.5
Solyc05g050007.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-51 203.8 157 67.5
Solyc06g050293.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-51 203.8 157 67.5
Solyc07g042105.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-51 203.8 157 67.5
Solyc08g015755.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-51 203.8 157 67.5
Solyc10g054015.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-51 203.8 157 67.5
Solyc11g072605.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.5e-51 203.8 157 67.5
Solyc01g010755.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.7e-50 202.6 157 66.9
Solyc02g065757.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.7e-50 202.6 157 66.9
Solyc05g013535.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.7e-50 202.6 157 66.9
Solyc02g071535.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.2e-50 202.2 157 66.9
Solyc06g150108.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.4e-50 200.7 157 66.9
Solyc11g066163.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.4e-50 200.7 157 65.6
Solyc12g049175.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.4e-50 200.7 157 66.9
Sopen02g035500 Solanum pennellii HOM05D000176 ORTHO05D011887 6.4e-50 200.7 157 66.2
Solyc02g089465.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.9e-49 199.1 157 66.9
Solyc01g081605.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.4e-49 197.6 157 65.6
Solyc08g014614.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.4e-49 197.6 157 66.2
Solyc09g014785.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.2e-49 196.8 157 66.2
PGSC0003DMG400038235 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.2e-48 196.4 157 63.1
Solyc09g061637.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.6e-46 187.6 100 90.0
Solyc11g042857.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.5e-35 152.9 157 56.7
PGSC0003DMG402028807 Solanum tuberosum HOM05D000176 ORTHO05D000106 3.0e-31 138.7 157 45.2
Solyc06g049037.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.9e-26 121.3 157 47.8
Solyc11g065555.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.2e-24 116.7 157 47.1
Solyc11g066165.1 Solanum lycopersicum HOM05D000176 ORTHO05D011887 7.6e-19 97.4 55 83.6
Solyc11g011373.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.1e-17 90.9 97 51.5
Solyc02g063455.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 6.0e-16 87.8 97 50.5
Solyc08g014605.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.9e-16 87.4 97 49.5
CAN.G628.50 Capsicum annuum HOM05D000212 ORTHO05D011887 1.0e-15 87.0 77 53.2
Solyc07g150106.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.7e-15 84.0 94 50.0
CAN.G798.66 Capsicum annuum HOM05D000176 ORTHO05D011887 1.3e-13 80.1 70 50.0
CAN.G1099.13 Capsicum annuum HOM05D000176 ORTHO05D011887 2.8e-13 79.0 71 49.3
Peaxi162Scf00351g00224 Petunia axillaris HOM05D000176 ORTHO05D000106 4.0e-12 75.1 97 40.2
Peaxi162Scf01022g00112 Petunia axillaris HOM05D000176 ORTHO05D000106 4.0e-12 75.1 97 40.2
CAN.G1134.13 Capsicum annuum HOM05D000176 ORTHO05D000017 1.5e-11 73.2 113 36.3
Peaxi162Scf00920g00411 Petunia axillaris HOM05D000176 ORTHO05D000106 3.8e-10 68.6 96 45.8
Peaxi162Scf00353g00056 Petunia axillaris HOM05D000176 ORTHO05D000106 1.9e-09 66.2 97 40.2
Peaxi162Scf00139g00122 Petunia axillaris HOM05D000176 ORTHO05D000106 3.2e-09 65.5 97 39.2
Peaxi162Scf00464g00118 Petunia axillaris HOM05D000176 ORTHO05D000106 5.5e-09 64.7 97 39.2
Solyc05g041785.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.5e-09 64.7 34 88.2
CAN.G492.83 Capsicum annuum HOM05D000025 ORTHO05D017277 4.6e-08 61.6 95 40.0
Cc02_g33570 Coffea canephora HOM05D000176 ORTHO05D000106 1.3e-07 60.1 112 39.3
Solyc03g083810.4 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.3e-07 60.1 98 35.7
Solyc10g018425.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.9e-07 58.5 95 35.8
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 8.7e-07 57.4 95 35.8
Sopen06g017070 Solanum pennellii HOM05D000176 ORTHO05D000106 8.7e-07 57.4 95 35.8
Cc00_g24290 Coffea canephora HOM05D000176 ORTHO05D000106 1.1e-06 57.0 112 38.4
QL02p071405 Quercus lobata HOM05D000176 ORTHO05D000106 4.3e-06 55.1 111 34.2
QL09p020558 Quercus lobata HOM05D000176 ORTHO05D000106 4.3e-06 55.1 111 34.2
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 4.3e-06 55.1 111 34.2
QL05p061244 Quercus lobata HOM05D000176 ORTHO05D000106 5.6e-06 54.7 111 32.4
QL10p058474 Quercus lobata HOM05D000176 ORTHO05D000106 5.6e-06 54.7 111 32.4
Solyc03g005550.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.6e-06 54.7 118 30.5
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 7.4e-06 54.3 111 32.4
QL03p000009 Quercus lobata HOM05D000176 ORTHO05D000106 9.6e-06 53.9 111 32.4
Solyc07g019497.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.6e-06 53.9 117 28.2
Sopen11g024340 Solanum pennellii HOM05D000176 ORTHO05D000106 9.6e-06 53.9 108 30.6
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 9.6e-06 53.9 117 29.1


User provided reference genes

Program Settings