Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 6.0e-149 530.8 265 100.0
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 6.3e-122 441.0 235 97.0
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 2.3e-116 422.5 235 92.3
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.2e-107 393.7 240 86.2
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.3e-106 390.2 240 85.4
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 4.1e-105 385.2 235 84.3
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 4.5e-88 328.6 240 75.4
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 2.9e-66 256.1 228 59.2
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 1.9e-65 253.4 216 60.2
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 2.7e-64 249.6 222 56.8
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 3.5e-64 249.2 244 57.8
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 3.0e-63 246.1 211 60.7
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 3.3e-62 242.7 227 56.8
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 4.3e-62 242.3 245 55.5
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 7.3e-62 241.5 243 53.5
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.6e-61 240.4 213 58.7
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 2.1e-61 240.0 245 53.5
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 2.4e-60 236.5 215 58.6
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.1e-60 236.1 213 59.2
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 1.5e-59 233.8 205 58.0
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 2.6e-59 233.0 212 57.1
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 3.4e-59 232.6 226 55.8
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 7.6e-59 231.5 203 61.6
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 9.9e-59 231.1 240 52.9
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 2.2e-58 229.9 157 70.7
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 2.9e-58 229.6 240 51.7
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 4.9e-58 228.8 234 53.8
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 8.4e-58 228.0 205 59.5
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.4e-57 227.3 248 53.6
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.9e-57 226.9 215 55.3
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 1.9e-57 226.9 256 52.0
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 5.4e-57 225.3 215 54.4
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 9.2e-57 224.6 219 55.7
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.2e-56 224.2 237 53.2
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.1e-56 223.4 267 49.4
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 3.5e-56 222.6 215 54.4
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 4.6e-56 222.2 234 53.4
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 6.0e-56 221.9 219 54.8
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 7.8e-56 221.5 221 51.1
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 7.8e-56 221.5 219 54.8
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 7.8e-56 221.5 207 56.5
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 7.8e-56 221.5 177 61.0
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 7.8e-56 221.5 150 71.3
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 1.0e-55 221.1 235 51.5
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.0e-55 221.1 218 54.6
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.3e-55 220.7 220 53.6
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 2.3e-55 219.9 214 56.1
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.3e-55 219.9 215 54.9
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 3.0e-55 219.5 219 54.3
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 3.0e-55 219.5 219 54.3
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 8.7e-55 218.0 221 51.6
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 8.7e-55 218.0 219 53.0
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 8.7e-55 218.0 223 52.5
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 1.1e-54 217.6 218 54.6
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.9e-54 216.9 219 52.5
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.9e-54 216.9 216 53.2
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 1.9e-54 216.9 223 49.3
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 2.5e-54 216.5 247 52.2
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 3.3e-54 216.1 207 53.1
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 3.3e-54 216.1 215 53.5
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 3.3e-54 216.1 221 53.4
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 5.6e-54 215.3 242 47.9
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 1.3e-53 214.2 222 53.2
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 4.8e-53 212.2 225 51.1
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.8e-52 210.3 214 53.3
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 1.5e-51 207.2 170 61.2
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 2.0e-51 206.8 224 50.9
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 9.9e-51 204.5 149 63.8
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 3.8e-50 202.6 259 47.5
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.1e-49 201.1 172 61.0
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 1.1e-49 201.1 150 66.7
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 5.4e-49 198.7 255 47.5
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 3.5e-48 196.1 157 61.1
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 1.6e-45 187.2 164 56.7
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 3.6e-45 186.0 264 44.3
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 4.8e-45 185.7 147 57.8
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 8.1e-45 184.9 240 44.6
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 2.4e-44 183.3 220 47.3
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 8.4e-42 174.9 219 47.5
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 1.1e-41 174.5 205 49.8
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 2.4e-41 173.3 245 42.9
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 2.7e-40 169.9 218 46.3
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 3.0e-39 166.4 235 42.1
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 5.1e-39 165.6 207 48.3
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 4.8e-37 159.1 172 54.1
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 6.2e-37 158.7 168 47.6
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 4.5e-35 152.5 146 47.9
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 7.6e-35 151.8 155 50.3
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 1.1e-33 147.9 101 68.3
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 2.5e-33 146.7 167 51.5
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 4.2e-33 146.0 224 43.8
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 1.0e-31 141.4 176 46.6
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.9e-30 137.1 132 54.5
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.3e-29 134.4 203 46.3
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 2.9e-26 123.2 166 42.2
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 8.7e-23 111.7 219 36.1
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 4.5e-19 99.4 151 35.1
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.2e-16 91.3 170 34.7
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 2.1e-16 90.5 60 66.7
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 4.6e-16 89.4 142 41.5
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 7.4e-14 82.0 166 31.3
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 3.7e-13 79.7 51 62.7
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 1.0e-10 71.6 90 41.1


User provided reference genes

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