Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g014080.3 Solanum lycopersicum HOM05D000485 ORTHO05D000341 3.9e-20 100.5 51 100.0
Sopen05g009080 Solanum pennellii HOM05D000485 ORTHO05D000341 2.5e-19 97.8 51 98.0
Sopen05g020350 Solanum pennellii HOM05D000485 ORTHO05D000341 2.5e-19 97.8 51 98.0
Sopen06g019910 Solanum pennellii HOM05D000485 ORTHO05D000341 2.5e-19 97.8 51 98.0
Solyc06g059800.3 Solanum lycopersicum HOM05D000485 ORTHO05D000341 1.6e-18 95.1 51 96.1
Peaxi162Scf00505g00032 Petunia axillaris HOM05D000485 ORTHO05D000341 2.1e-18 94.7 51 92.2
PGSC0003DMG400013030 Solanum tuberosum HOM05D000485 ORTHO05D000341 4.7e-18 93.6 51 94.1
Nitab4.5_0001530g0020 Nicotiana tabacum HOM05D000485 ORTHO05D000341 8.1e-18 92.8 51 92.2
Nitab4.5_0013238g0010 Nicotiana tabacum HOM05D000485 ORTHO05D000341 4.0e-17 90.5 51 90.2
Peaxi162Scf28772g00001 Petunia axillaris HOM05D000485 ORTHO05D000341 3.4e-16 87.4 51 84.3
Peaxi162Scf00816g00042 Petunia axillaris HOM05D000485 ORTHO05D000341 2.9e-15 84.3 48 85.4
CAN.G319.10 Capsicum annuum HOM05D000485 ORTHO05D000341 4.6e-13 77.0 58 75.9
TAR381G0293 Trochodendron aralioides HOM05D000485 ORTHO05D000341 2.3e-12 74.7 51 74.5
Dinv25776 Davidia involucrata HOM05D000485 ORTHO05D000341 5.1e-12 73.6 48 77.1
Aqoxy6G00346 Aquilegia oxysepala HOM05D000485 ORTHO05D009791 6.6e-12 73.2 46 78.3
Glyma.04G242800 Glycine max HOM05D000485 ORTHO05D000341 8.7e-12 72.8 51 70.6
GSVIVG01009980001 Vitis vinifera HOM05D000485 ORTHO05D000341 1.1e-11 72.4 51 72.5
Eucgr.F02763 Eucalyptus grandis HOM05D000485 ORTHO05D000341 1.9e-11 71.6 50 76.0
FAN27G2546 Fragaria x ananassa HOM05D000485 ORTHO05D000341 2.5e-11 71.2 48 72.9
VMungo1309G0192 Vigna mungo HOM05D000485 ORTHO05D000341 2.5e-11 71.2 51 68.6
SGA_v2.0_scaffold48G17922 Striga asiatica HOM05D000485 ORTHO05D000341 3.3e-11 70.9 50 74.0
Lalb_Chr08g0240901 Lupinus albus HOM05D000485 ORTHO05D000341 4.3e-11 70.5 48 72.9
Prupe.8G012600 Prunus persica HOM05D000485 ORTHO05D000341 4.3e-11 70.5 48 72.9
Cc10_g13250 Coffea canephora HOM05D000485 ORTHO05D000341 5.6e-11 70.1 51 72.5
Actinidia10683 Actinidia chinensis HOM05D000485 ORTHO05D000341 7.3e-11 69.7 48 77.1
QL09p029521 Quercus lobata HOM05D000485 ORTHO05D000341 7.3e-11 69.7 47 74.5
Psat5g083360 Pisum sativum HOM05D000485 ORTHO05D000341 9.6e-11 69.3 48 72.9
CSS0029601 Camellia sinensis var. sinensis HOM05D000485 ORTHO05D000341 1.3e-10 68.9 47 72.3
MBI03_g20851_MAGBIO Magnolia biondii HOM05D000485 ORTHO05D000341 1.6e-10 68.6 48 70.8
Glyma.06G120500 Glycine max HOM05D000485 ORTHO05D000341 2.1e-10 68.2 51 66.7
Lj1g0019935 Lotus japonicus HOM05D000485 ORTHO05D000341 2.1e-10 68.2 52 71.2
Lalb_Chr04g0263601 Lupinus albus HOM05D000485 ORTHO05D000341 2.1e-10 68.2 51 68.6
SGA_v2.0_scaffold24G10389 Striga asiatica HOM05D000485 ORTHO05D000341 2.1e-10 68.2 50 72.0
Ah.05g169230 Amaranthus hybridus HOM05D000485 ORTHO05D000341 2.8e-10 67.8 49 73.5
MD10G1008800 Malus domestica HOM05D000485 ORTHO05D000341 2.8e-10 67.8 49 73.5
Oeu001552.1 Olea europaea HOM05D000485 ORTHO05D000341 2.8e-10 67.8 51 68.6
Oeu047145.1 Olea europaea HOM05D000485 ORTHO05D000341 2.8e-10 67.8 48 72.9
SalBow7G3197 Salvia bowleyana HOM05D000485 ORTHO05D000341 3.6e-10 67.4 47 72.3
VMungo0647G1924 Vigna mungo HOM05D000485 ORTHO05D000341 3.6e-10 67.4 52 71.2
Gohir.D02G075300 Gossypium hirsutum HOM05D000485 ORTHO05D000341 4.8e-10 67.0 49 75.5
Gorai.005G084700 Gossypium raimondii HOM05D000485 ORTHO05D000341 4.8e-10 67.0 49 75.5
MD05G1010300 Malus domestica HOM05D000485 ORTHO05D000341 4.8e-10 67.0 49 73.5
Cpa.g.sc26.73 Carica papaya HOM05D000485 ORTHO05D000341 6.2e-10 66.6 49 75.5
CiPaw.16G019400 Carya illinoinensis HOM05D000485 ORTHO05D000341 6.2e-10 66.6 48 75.0
Gohir.A02G068800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 6.2e-10 66.6 49 75.5
Medtr3g088885 Medicago truncatula HOM05D000485 ORTHO05D000341 6.2e-10 66.6 48 70.8
FAN15G2171 Fragaria x ananassa HOM05D000485 ORTHO05D000341 8.1e-10 66.2 51 68.6
FAN20G0149 Fragaria x ananassa HOM05D000485 ORTHO05D000341 8.1e-10 66.2 51 68.6
Thecc.08G138200 Theobroma cacao HOM05D000485 ORTHO05D000341 8.1e-10 66.2 49 75.5
FvH4_2g15200 Fragaria vesca HOM05D000485 ORTHO05D000341 1.1e-09 65.9 51 68.6
FAN24G3133 Fragaria x ananassa HOM05D000485 ORTHO05D000341 1.1e-09 65.9 51 68.6
Phvul.001G065550 Phaseolus vulgaris HOM05D000485 ORTHO05D000341 1.1e-09 65.9 52 67.3
AUR62013462 Chenopodium quinoa HOM05D000485 ORTHO05D000341 1.4e-09 65.5 49 71.4
Duzib041G0093 Durio zibethinus HOM05D000485 ORTHO05D000341 1.4e-09 65.5 49 73.5
Migut.C01092 Erythranthe guttata HOM05D000485 ORTHO05D000341 1.4e-09 65.5 51 70.6
Potri.005G185600 Populus trichocarpa HOM05D000485 ORTHO05D000341 1.4e-09 65.5 48 68.8
RcHm_v2.0_Chr6g0277951 Rosa chinensis HOM05D000485 ORTHO05D000341 1.4e-09 65.5 48 66.7
Atru.chr13.1647 Acer truncatum HOM05D000485 ORTHO05D000341 1.8e-09 65.1 51 70.6
Medtr1g029520 Medicago truncatula HOM05D000485 ORTHO05D000341 1.8e-09 65.1 52 65.4
Potri.002G074800 Populus trichocarpa HOM05D000485 ORTHO05D000341 1.8e-09 65.1 47 68.1
Sabra02G0058300 Salix brachista HOM05D000485 ORTHO05D000341 1.8e-09 65.1 48 64.6
COL.COLO4_05036 Corchorus olitorius HOM05D000485 ORTHO05D000341 3.1e-09 64.3 49 71.4
Hma1.2p1_0107F.1_g051240 Hydrangea macrophylla HOM05D000485 ORTHO05D000341 3.1e-09 64.3 49 71.4
Hund17375 Selenicereus undatus HOM05D000485 ORTHO05D000341 3.1e-09 64.3 50 70.0
AUR62007672 Chenopodium quinoa HOM05D000485 ORTHO05D000341 4.0e-09 63.9 49 69.4
Nn5g28513 Nelumbo nucifera HOM05D000485 ORTHO05D000341 4.0e-09 63.9 49 69.4
TPR.G30551 Trifolium pratense HOM05D000485 ORTHO05D000341 4.0e-09 63.9 49 67.3
EL10Ac1g01408 Beta vulgaris HOM05D000485 ORTHO05D000341 5.3e-09 63.5 49 71.4
Lj1g0024861 Lotus japonicus HOM05D000485 ORTHO05D000341 5.3e-09 63.5 52 65.4
Manes.18G085000 Manihot esculenta HOM05D000485 ORTHO05D000341 5.3e-09 63.5 48 66.7
Ca_12651_v3 Cicer arietinum L. HOM05D000485 ORTHO05D000341 6.9e-09 63.2 52 63.5
MSTRG.25344 Avicennia marina HOM05D000485 ORTHO05D000341 1.2e-08 62.4 50 64.0
CANSAT21G1821 Cannabis sativa HOM05D000485 ORTHO05D000341 1.2e-08 62.4 52 71.2
Glyma.14G158900 Glycine max HOM05D000485 ORTHO05D000341 1.2e-08 62.4 52 67.3
Ca_16638_v3 Cicer arietinum L. HOM05D000485 ORTHO05D000341 2.0e-08 61.6 48 66.7
Hund26762 Selenicereus undatus HOM05D000485 ORTHO05D000341 2.0e-08 61.6 51 66.7
Haze_17674 Corylus avellana HOM05D000485 ORTHO05D000341 2.6e-08 61.2 48 70.8
Gohir.D05G241800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 3.4e-08 60.8 50 68.0
Gorai.009G251200 Gossypium raimondii HOM05D000485 ORTHO05D000341 3.4e-08 60.8 50 68.0
Glyma.13G036400 Glycine max HOM05D000485 ORTHO05D000341 4.4e-08 60.5 53 64.2
Sabra05G0141800 Salix brachista HOM05D000485 ORTHO05D000341 4.4e-08 60.5 49 65.3
Peaxi162Scf00505g00021 Petunia axillaris HOM05D000485 ORTHO05D000341 5.8e-08 60.1 35 82.9
Sc15g0003320 Simmondsia chinensis HOM05D000485 ORTHO05D000341 5.8e-08 60.1 50 70.0
Cfa018395 Carpinus fangiana HOM05D000485 ORTHO05D000341 7.6e-08 59.7 48 66.7
SalBow7G3328 Salvia bowleyana HOM05D000485 ORTHO05D000341 9.9e-08 59.3 43 69.8
Gohir.A05G240700 Gossypium hirsutum HOM05D000485 ORTHO05D000341 2.2e-07 58.2 49 67.3
Lsat_1_v5_gn_1_9340 Lactuca sativa HOM05D000485 ORTHO05D000341 4.9e-07 57.0 52 61.5
arahy.Tifrunner.gnm1.ann1.BQ360W Arachis hypogaea HOM05D000485 ORTHO05D000341 8.4e-07 56.2 50 62.0
HanXRQChr02g0041871 Helianthus annuus HOM05D000485 ORTHO05D000341 8.4e-07 56.2 48 58.3
PGR042G1651 Punica granatum HOM05D000485 ORTHO05D000341 8.4e-07 56.2 53 58.5
arahy.Tifrunner.gnm1.ann1.K57DW9 Arachis hypogaea HOM05D000485 ORTHO05D000341 1.1e-06 55.8 50 64.0
TWI60G0344 Tripterygium wilfordii HOM05D000485 ORTHO05D000341 1.1e-06 55.8 51 60.8
MSTRG.1391 Avicennia marina HOM05D000485 ORTHO05D000341 1.4e-06 55.5 47 57.4
Ciclev10001100m.g Citrus clementina HOM05D000485 ORTHO05D000341 1.4e-06 55.5 53 60.4
Lj4A685T33 Lonicera japonica HOM05D000485 ORTHO05D000341 1.9e-06 55.1 53 66.0
DCAR_001094 Daucus carota HOM05D000485 ORTHO05D000341 5.4e-06 53.5 49 61.2
THA.LOC104812060 Tarenaya hassleriana HOM05D000485 ORTHO05D000341 5.4e-06 53.5 54 55.6


User provided reference genes

Program Settings