Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 2.3e-193 678.7 335 100.0
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 8.4e-164 580.5 306 95.4
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 3.6e-159 565.1 306 92.2
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 8.7e-153 543.9 292 92.1
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 1.1e-144 516.9 288 86.8
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 8.2e-143 510.8 288 85.4
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 3.7e-127 458.8 278 82.0
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 4.7e-106 388.7 278 69.8
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 1.8e-105 386.7 278 69.4
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 1.0e-100 370.9 278 64.7
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 2.3e-100 369.8 278 66.5
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 5.0e-100 368.6 293 60.4
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 6.5e-100 368.2 280 65.4
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 1.5e-99 367.1 278 65.5
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 6.1e-98 361.7 281 64.1
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 1.8e-97 360.1 278 65.8
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 5.2e-97 358.6 280 64.6
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 2.6e-96 356.3 234 71.4
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 2.6e-96 356.3 276 62.7
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 3.4e-96 355.9 277 62.8
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 3.4e-96 355.9 291 62.5
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 7.5e-96 354.8 277 65.0
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 1.1e-94 350.9 281 62.6
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 2.4e-94 349.7 283 61.8
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 1.2e-93 347.4 277 61.4
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 7.8e-93 344.7 278 62.2
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 2.9e-92 342.8 279 65.2
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 2.9e-92 342.8 376 51.1
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 5.0e-92 342.0 275 59.6
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 9.5e-91 337.8 283 60.1
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 9.5e-91 337.8 282 59.2
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 1.6e-90 337.0 278 59.7
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 4.7e-90 335.5 275 59.6
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 6.1e-90 335.1 284 60.9
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 8.0e-90 334.7 278 61.2
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 8.0e-90 334.7 282 62.4
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 1.0e-89 334.3 282 59.2
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 1.4e-89 334.0 281 58.7
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 2.3e-89 333.2 278 59.4
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 5.2e-89 332.0 281 58.4
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 5.2e-89 332.0 278 60.1
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 8.9e-89 331.3 281 58.0
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 1.2e-88 330.9 275 58.9
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 1.5e-88 330.5 283 57.2
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 2.0e-88 330.1 281 59.8
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 4.4e-88 328.9 278 58.6
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 4.4e-88 328.9 279 57.7
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 4.4e-88 328.9 323 53.6
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 7.5e-88 328.2 279 58.8
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 7.5e-88 328.2 281 60.5
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 1.7e-87 327.0 277 58.8
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 1.7e-87 327.0 280 58.9
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 1.7e-87 327.0 280 58.9
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 8.3e-87 324.7 282 61.7
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 1.1e-86 324.3 272 60.7
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 2.4e-86 323.2 280 58.9
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.4e-86 323.2 277 57.0
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 7.0e-86 321.6 280 58.2
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 7.0e-86 321.6 299 53.5
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 7.0e-86 321.6 288 56.6
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 9.2e-86 321.2 277 57.4
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 2.7e-85 319.7 280 58.6
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 5.9e-85 318.5 280 57.5
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 5.9e-85 318.5 280 58.2
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 7.8e-85 318.2 306 52.0
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 1.3e-84 317.4 280 57.9
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 3.0e-84 316.2 280 57.9
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 3.9e-84 315.8 280 57.1
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 1.9e-83 313.5 280 57.1
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 1.2e-82 310.8 280 56.1
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 2.8e-82 309.7 280 57.5
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 2.3e-81 306.6 272 58.1
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 1.3e-79 300.8 278 58.3
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 8.3e-79 298.1 269 56.5
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 1.1e-78 297.7 287 53.3
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 1.4e-78 297.4 204 65.2
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 1.4e-78 297.4 359 45.7
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 1.9e-78 297.0 279 54.8
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 3.2e-78 296.2 256 56.6
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 1.5e-75 287.3 288 51.4
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 3.3e-75 286.2 498 37.6
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 8.9e-73 278.1 250 60.0
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 8.3e-71 271.6 250 55.6
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 3.2e-70 269.6 246 55.7
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 4.1e-70 269.2 205 62.0
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 4.3e-67 259.2 277 49.8
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 5.6e-67 258.8 257 53.3
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 5.6e-67 258.8 280 46.4
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 2.8e-66 256.5 158 74.1
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 7.3e-51 205.3 217 55.8
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 7.3e-51 205.3 180 57.8
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 7.3e-51 205.3 184 58.7
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 2.8e-50 203.4 209 44.5
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 4.9e-47 192.6 184 46.7
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 2.4e-46 190.3 190 53.7
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 3.5e-45 186.4 253 37.5
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 1.3e-44 184.5 209 40.2
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 2.1e-42 177.2 110 70.9
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 6.7e-36 155.6 185 48.1
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 1.8e-33 147.5 107 60.7
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 2.1e-29 134.0 200 39.5
Hma1.2p1_1357F.1_g277905 Hydrangea macrophylla HOM05D003201 ORTHO05D008914 9.0e-25 118.6 70 71.4
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 6.5e-23 112.5 97 56.7
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 1.9e-22 110.9 177 39.0
CDE05G1961 Ceratophyllum demersum HOM05D003201 ORTHO05D008914 3.2e-22 110.2 140 45.7
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 4.6e-21 106.3 86 58.1
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 3.1e-17 93.6 68 54.4
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 8.8e-12 75.5 242 23.6
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 2.2e-10 70.9 41 65.9
Phvul.009G102700 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 4.2e-06 56.6 275 23.6


User provided reference genes

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