Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g012820.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 1.0e-85 320.1 168 100.0
Sopen05g007660 Solanum pennellii HOM05D003448 ORTHO05D004028 6.7e-69 264.2 148 95.9
Solyc05g012850.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 4.1e-66 255.0 148 91.2
Sopen05g007670 Solanum pennellii HOM05D003448 ORTHO05D004028 4.1e-66 255.0 148 91.2
PGSC0003DMG400046292 Solanum tuberosum HOM05D003448 ORTHO05D004028 6.7e-53 211.1 150 78.7
Nitab4.5_0000391g0110 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.4e-37 160.2 150 59.3
Nitab4.5_0000391g0120 Nicotiana tabacum HOM05D003448 ORTHO05D004028 2.6e-36 156.0 147 59.2
Nitab4.5_0000391g0160 Nicotiana tabacum HOM05D003448 ORTHO05D004028 5.7e-36 154.8 150 58.7
Sopen05g007690 Solanum pennellii HOM05D003448 ORTHO05D004028 3.1e-34 149.1 148 56.1
Nitab4.5_0004471g0010 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.1e-34 148.7 150 56.7
Solyc05g012860.2 Solanum lycopersicum HOM05D003448 ORTHO05D004028 7.0e-34 147.9 148 55.4
Nitab4.5_0004471g0060 Nicotiana tabacum HOM05D003448 ORTHO05D004028 3.5e-33 145.6 148 54.7
Peaxi162Scf00222g00119 Petunia axillaris HOM05D003448 ORTHO05D004028 3.6e-30 135.6 136 54.4
PGSC0003DMG400028404 Solanum tuberosum HOM05D003448 ORTHO05D004028 6.8e-29 131.3 148 52.0
Nitab4.5_0000391g0130 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.8e-27 125.2 140 51.4
Peaxi162Scf00222g00125 Petunia axillaris HOM05D003448 ORTHO05D004028 1.1e-26 124.0 131 51.1
Nitab4.5_0000014g0220 Nicotiana tabacum HOM05D003448 ORTHO05D004028 4.7e-14 82.0 170 36.5
CSS0040782 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 1.0e-13 80.9 133 36.8
Nitab4.5_0004471g0140 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.0e-13 80.9 89 49.4
CiPaw.05G129300 Carya illinoinensis HOM05D003448 ORTHO05D004028 1.4e-13 80.5 147 36.7
Phvul.002G168700 Phaseolus vulgaris HOM05D003448 ORTHO05D004028 8.9e-13 77.8 137 38.0
Sopen04g001550 Solanum pennellii HOM05D003448 ORTHO05D004028 1.2e-12 77.4 154 33.8
Nitab4.5_0007467g0030 Nicotiana tabacum HOM05D003448 ORTHO05D004028 1.5e-12 77.0 154 37.7
Ciclev10033637m.g Citrus clementina HOM05D003448 ORTHO05D004028 2.6e-12 76.3 144 36.8
Solyc04g005530.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 2.6e-12 76.3 154 33.1
unitig_8.g3960 Utricularia gibba HOM05D003448 ORTHO05D004028 2.6e-12 76.3 137 38.7
Atru.chr11.1710 Acer truncatum HOM05D003448 ORTHO05D004028 5.7e-12 75.1 142 37.3
CARHR145690 Cardamine hirsuta HOM05D003448 ORTHO05D004028 5.7e-12 75.1 152 38.8
RcHm_v2.0_Chr4g0439081 Rosa chinensis HOM05D003448 ORTHO05D004028 5.7e-12 75.1 146 34.9
Atru.chr11.1709 Acer truncatum HOM05D003448 ORTHO05D004028 7.5e-12 74.7 135 37.8
A02p33350 Brassica napus HOM05D003448 ORTHO05D004028 7.5e-12 74.7 143 36.4
Gohir.A13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 1.3e-11 73.9 139 39.6
PGSC0003DMG400002851 Solanum tuberosum HOM05D003448 ORTHO05D004028 1.3e-11 73.9 153 34.0
MSTRG.2328 Avicennia marina HOM05D003448 ORTHO05D004028 2.2e-11 73.2 140 35.0
Migut.E00067 Erythranthe guttata HOM05D003448 ORTHO05D004028 2.2e-11 73.2 141 39.0
Eucgr.G02473 Eucalyptus grandis HOM05D003448 ORTHO05D004028 2.2e-11 73.2 140 37.9
Cc11_g07300 Coffea canephora HOM05D003448 ORTHO05D004028 2.9e-11 72.8 136 35.3
Sopen05g007650 Solanum pennellii HOM05D003448 ORTHO05D004028 3.7e-11 72.4 61 60.7
BcaB07g30304 Brassica carinata HOM05D003448 ORTHO05D004028 4.9e-11 72.0 142 36.6
CANSAT64G1203 Cannabis sativa HOM05D003448 ORTHO05D004028 6.4e-11 71.6 155 38.1
Cc11_g12520 Coffea canephora HOM05D003448 ORTHO05D004028 6.4e-11 71.6 148 34.5
Thhalv10005445m.g Eutrema salsugineum HOM05D003448 ORTHO05D004028 6.4e-11 71.6 144 37.5
Cfa008923 Carpinus fangiana HOM05D003448 ORTHO05D004028 1.4e-10 70.5 147 36.7
Prupe.1G280200 Prunus persica HOM05D003448 ORTHO05D004028 1.4e-10 70.5 134 35.8
QL03p069872 Quercus lobata HOM05D003448 ORTHO05D004028 1.4e-10 70.5 156 34.6
Eucgr.G02471 Eucalyptus grandis HOM05D003448 ORTHO05D004028 1.8e-10 70.1 141 34.8
Solyc05g012810.3 Solanum lycopersicum HOM05D003448 ORTHO05D004028 1.8e-10 70.1 55 65.5
Lsat_1_v5_gn_3_51801 Lactuca sativa HOM05D003448 ORTHO05D004028 2.4e-10 69.7 148 33.1
MD16G1066700 Malus domestica HOM05D003448 ORTHO05D004028 2.4e-10 69.7 141 33.3
SGA_v2.0_scaffold287G47147 Striga asiatica HOM05D003448 ORTHO05D004028 2.4e-10 69.7 148 35.8
Thecc.02G338900 Theobroma cacao HOM05D003448 ORTHO05D004028 2.4e-10 69.7 145 35.9
Gohir.D13G078600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 3.2e-10 69.3 139 38.1
THA.LOC104801852 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 4.1e-10 68.9 135 38.5
THA.LOC104824071 Tarenaya hassleriana HOM05D003448 ORTHO05D004028 4.1e-10 68.9 143 37.1
VMungo0251G1914 Vigna mungo HOM05D003448 ORTHO05D004028 4.1e-10 68.9 136 36.8
Gorai.013G089900 Gossypium raimondii HOM05D003448 ORTHO05D004028 5.4e-10 68.6 139 37.4
Aa31LG2G7210 Aethionema arabicum HOM05D003448 ORTHO05D004028 7.0e-10 68.2 157 35.7
RcHm_v2.0_Chr4g0439091 Rosa chinensis HOM05D003448 ORTHO05D004028 1.2e-09 67.4 142 34.5
AL5G13040 Arabidopsis lyrata HOM05D003448 ORTHO05D004028 1.6e-09 67.0 142 36.6
Gorai.013G089800 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.6e-09 67.0 139 36.7
SalBow8G5474 Salvia bowleyana HOM05D003448 ORTHO05D004028 1.6e-09 67.0 132 36.4
A09p24360 Brassica napus HOM05D003448 ORTHO05D004028 2.0e-09 66.6 142 35.9
BraA09t38029Z Brassica rapa HOM05D003448 ORTHO05D004028 2.0e-09 66.6 142 35.9
Gohir.A13G078300 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.0e-09 66.6 139 37.4
Gohir.D13G078400 Gossypium hirsutum HOM05D003448 ORTHO05D004028 2.0e-09 66.6 139 36.7
BcaB07g30674 Brassica carinata HOM05D003448 ORTHO05D004028 3.5e-09 65.9 142 36.6
Gohir.D02G127600 Gossypium hirsutum HOM05D003448 ORTHO05D004028 4.6e-09 65.5 148 36.5
Gorai.013G089600 Gossypium raimondii HOM05D003448 ORTHO05D004028 4.6e-09 65.5 139 36.0
EL10Ac6g13273 Beta vulgaris HOM05D003448 ORTHO05D004028 5.9e-09 65.1 159 33.3
Cpa.g.sc1.73 Carica papaya HOM05D003448 ORTHO05D004028 5.9e-09 65.1 140 36.4
Glyma.20G030700 Glycine max HOM05D003448 ORTHO05D004028 5.9e-09 65.1 131 38.2
Lsat_1_v5_gn_8_49240 Lactuca sativa HOM05D003448 ORTHO05D004028 5.9e-09 65.1 150 32.0
AT3G11810 Arabidopsis thaliana HOM05D003448 ORTHO05D004028 7.8e-09 64.7 147 35.4
CANSAT64G0892 Cannabis sativa HOM05D003448 ORTHO05D004028 7.8e-09 64.7 154 29.2
Lsat_1_v5_gn_8_49220 Lactuca sativa HOM05D003448 ORTHO05D004028 7.8e-09 64.7 138 33.3
Sp2g14260 Schrenkiella parvula HOM05D003448 ORTHO05D004028 7.8e-09 64.7 150 35.3
VMungo0251G3339 Vigna mungo HOM05D003448 ORTHO05D004028 7.8e-09 64.7 135 37.8
BcaC04g21492 Brassica carinata HOM05D003448 ORTHO05D004028 1.0e-08 64.3 146 33.6
C09p31190 Brassica napus HOM05D003448 ORTHO05D004028 1.0e-08 64.3 146 33.6
BolC9t55975H Brassica oleracea HOM05D003448 ORTHO05D004028 1.0e-08 64.3 146 33.6
Gorai.005G143200 Gossypium raimondii HOM05D003448 ORTHO05D004028 1.0e-08 64.3 148 36.5
Actinidia12305 Actinidia chinensis HOM05D003448 ORTHO05D004028 1.3e-08 63.9 129 31.8
Dinv34100 Davidia involucrata HOM05D003448 ORTHO05D004028 1.3e-08 63.9 135 31.1
AUR62032847 Chenopodium quinoa HOM05D003448 ORTHO05D004028 1.7e-08 63.5 147 32.0
Lsat_1_v5_gn_4_10361 Lactuca sativa HOM05D003448 ORTHO05D004028 1.7e-08 63.5 153 30.1
Potri.010G163300 Populus trichocarpa HOM05D003448 ORTHO05D004028 1.7e-08 63.5 142 33.1
Aqoxy3G03502 Aquilegia oxysepala HOM05D003448 ORTHO05D004028 3.0e-08 62.8 139 34.5
BcaC03g17206 Brassica carinata HOM05D003448 ORTHO05D004028 3.0e-08 62.8 132 33.3
Migut.L01240 Erythranthe guttata HOM05D003448 ORTHO05D004028 3.0e-08 62.8 132 35.6
Hma1.2p1_0357F.1_g134310 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 3.9e-08 62.4 128 35.9
Lalb_Chr09g0329141 Lupinus albus HOM05D003448 ORTHO05D004028 3.9e-08 62.4 120 35.0
Manes.01G031900 Manihot esculenta HOM05D003448 ORTHO05D004028 3.9e-08 62.4 137 32.8
TAR371G0373 Trochodendron aralioides HOM05D003448 ORTHO05D004028 3.9e-08 62.4 147 32.7
Oeu057654.1 Olea europaea HOM05D003448 ORTHO05D004028 5.0e-08 62.0 148 31.1
Potri.008G091600 Populus trichocarpa HOM05D003448 ORTHO05D004028 5.0e-08 62.0 146 37.0
HanXRQChr12g0379221 Helianthus annuus HOM05D003448 ORTHO05D004028 8.6e-08 61.2 135 31.1
Peaxi162Scf00187g00126 Petunia axillaris HOM05D003448 ORTHO05D004028 8.6e-08 61.2 141 32.6
TAR371G1243 Trochodendron aralioides HOM05D003448 ORTHO05D004028 8.6e-08 61.2 135 31.9
Manes.05G106600 Manihot esculenta HOM05D003448 ORTHO05D004028 1.1e-07 60.8 148 33.8
Psat7g154240 Pisum sativum HOM05D003448 ORTHO05D004028 1.5e-07 60.5 157 31.8
COL.COLO4_27963 Corchorus olitorius HOM05D003448 ORTHO05D004028 1.9e-07 60.1 124 37.9
Duzib248G1355 Durio zibethinus HOM05D003448 ORTHO05D004028 3.3e-07 59.3 139 34.5
Duzib251G0906 Durio zibethinus HOM05D003448 ORTHO05D004028 3.3e-07 59.3 153 34.0
Hund25204 Selenicereus undatus HOM05D003448 ORTHO05D004028 3.3e-07 59.3 155 31.6
Sabra08G0068600 Salix brachista HOM05D003448 ORTHO05D004028 7.3e-07 58.2 129 38.8
Ah.03g134640 Amaranthus hybridus HOM05D003448 ORTHO05D004028 1.6e-06 57.0 155 32.9
Hma1.2p1_0354F.1_g133775 Hydrangea macrophylla HOM05D003448 ORTHO05D004028 1.6e-06 57.0 142 32.4
FvH4_4g30670 Fragaria vesca HOM05D003448 ORTHO05D004028 2.1e-06 56.6 135 34.1
Medtr4g082550 Medicago truncatula HOM05D003448 ORTHO05D004028 2.1e-06 56.6 172 30.8
Glyma.20G030300 Glycine max HOM05D003448 ORTHO05D004028 2.8e-06 56.2 167 30.5
Lsat_1_v5_gn_8_49320 Lactuca sativa HOM05D003448 ORTHO05D004028 2.8e-06 56.2 141 31.9
Oeu021088.1 Olea europaea HOM05D003448 ORTHO05D004028 2.8e-06 56.2 138 31.9
DCAR_023813 Daucus carota HOM05D003448 ORTHO05D004028 4.7e-06 55.5 125 29.6
Glyma.20G030600 Glycine max HOM05D003448 ORTHO05D004028 4.7e-06 55.5 150 32.0
PGR016G0005 Punica granatum HOM05D003448 ORTHO05D004028 4.7e-06 55.5 128 34.4
PGR119G2543 Punica granatum HOM05D003448 ORTHO05D004028 4.7e-06 55.5 128 34.4
CSS0006655 Camellia sinensis var. sinensis HOM05D003448 ORTHO05D004028 6.2e-06 55.1 135 28.9


User provided reference genes

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