Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 6.0e-283 976.9 498 100.0
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 7.8e-275 949.9 498 97.0
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 4.2e-260 901.0 498 91.6
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 1.8e-186 656.4 494 69.8
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 6.0e-182 641.3 527 66.4
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 6.8e-178 627.9 484 65.9
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 1.2e-171 607.1 527 63.0
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 3.4e-169 599.0 494 60.7
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 1.1e-162 577.4 550 56.0
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 2.4e-162 576.2 474 63.1
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 5.2e-162 575.1 487 60.0
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 5.2e-162 575.1 463 63.1
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 2.6e-161 572.8 485 60.6
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 7.6e-161 571.2 494 59.3
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 1.9e-159 566.6 491 59.7
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 3.2e-159 565.8 497 60.4
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 5.4e-159 565.1 482 59.8
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 6.0e-158 561.6 494 58.5
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 1.7e-157 560.1 487 59.1
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 1.9e-156 556.6 480 59.6
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 9.6e-156 554.3 482 59.8
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 4.8e-155 552.0 486 60.3
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 6.4e-152 541.6 481 59.0
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 7.1e-151 538.1 475 58.7
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 3.3e-148 529.3 485 58.4
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 5.6e-148 528.5 485 58.1
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 2.4e-138 496.5 483 54.5
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 5.5e-135 485.3 488 54.9
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 1.1e-130 471.1 493 52.7
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.0e-117 427.9 380 58.9
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 2.2e-115 420.2 476 49.6
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.8e-115 419.9 371 59.3
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 2.0e-113 413.7 479 46.8
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 4.5e-113 412.5 479 46.3
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 1.4e-111 407.5 472 48.3
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.4e-106 391.0 411 53.0
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 4.8e-99 365.9 310 59.7
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 7.7e-97 358.6 443 44.9
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 1.2e-94 351.3 272 66.5
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.2e-94 351.3 353 53.3
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 1.1e-74 285.0 516 39.3
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 3.4e-52 210.3 181 56.9
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 3.3e-47 193.7 244 41.4
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 1.3e-38 165.2 126 63.5
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 2.1e-38 164.5 155 51.0
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 4.5e-28 130.2 95 68.4
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 4.5e-28 130.2 131 55.0
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 2.4e-21 107.8 76 67.1
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.5e-20 105.1 69 71.0
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.3e-14 85.5 60 68.3
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 9.0e-13 79.3 64 56.2
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 7.6e-12 76.3 100 41.0
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 2.7e-09 67.8 62 50.0
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 1.0e-08 65.9 277 26.4
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 1.9e-07 61.6 272 25.7
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-07 60.8 97 41.2


User provided reference genes

Program Settings