Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 3.8e-154 548.1 278 100.0
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 7.2e-153 543.9 278 98.9
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 7.5e-150 533.9 278 97.5
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 7.5e-150 533.9 278 97.5
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 2.3e-143 512.3 278 92.4
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 6.8e-143 510.8 278 91.7
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 9.5e-137 490.3 317 80.8
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 1.5e-121 439.9 278 78.1
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 4.3e-121 438.3 274 79.2
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 4.0e-119 431.8 278 76.6
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 3.4e-118 428.7 272 75.4
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 5.8e-118 427.9 271 74.9
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 1.7e-117 426.4 278 73.7
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 2.9e-117 425.6 277 75.8
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 2.9e-117 425.6 269 76.6
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 3.7e-117 425.2 274 75.2
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 3.7e-117 425.2 274 75.5
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 4.9e-117 424.9 269 76.2
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 8.3e-117 424.1 272 75.4
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.1e-116 423.7 274 75.2
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 1.1e-116 423.7 271 73.1
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 1.4e-116 423.3 274 75.5
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 1.4e-116 423.3 275 77.1
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 1.2e-115 420.2 278 75.5
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 2.1e-115 419.5 276 73.9
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 2.7e-115 419.1 274 73.7
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.5e-115 418.7 269 75.5
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 7.8e-115 417.5 279 73.8
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 1.3e-114 416.8 272 75.4
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.7e-114 416.4 273 74.7
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 3.0e-114 415.6 277 73.6
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 3.0e-114 415.6 278 73.0
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.1e-114 414.8 280 73.2
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 8.6e-114 414.1 269 75.8
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 1.5e-113 413.3 273 74.7
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 4.3e-113 411.8 272 75.0
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 5.6e-113 411.4 275 74.2
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 9.5e-113 410.6 271 74.5
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 9.5e-113 410.6 274 72.3
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 1.2e-112 410.2 265 74.7
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.8e-112 409.1 262 76.7
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 2.8e-112 409.1 274 72.3
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 2.8e-112 409.1 281 74.0
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.4e-111 406.8 274 71.9
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 1.4e-111 406.8 274 72.6
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 1.8e-111 406.4 281 73.3
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 2.4e-111 406.0 273 72.5
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 2.4e-111 406.0 267 73.4
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 8.9e-111 404.1 273 70.3
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 8.9e-111 404.1 270 73.7
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 4.4e-110 401.7 267 72.3
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 9.9e-110 400.6 270 73.0
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.3e-109 400.2 271 72.7
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 1.7e-109 399.8 272 73.5
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.2e-109 399.4 278 71.2
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 2.2e-109 399.4 265 72.1
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 3.8e-109 398.7 273 72.9
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 1.1e-108 397.1 271 73.8
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.1e-108 397.1 269 73.2
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.4e-108 396.7 267 72.3
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.4e-108 396.0 276 71.4
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 1.2e-107 393.7 274 71.5
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.6e-107 393.3 273 71.1
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.6e-107 393.3 273 71.1
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 2.1e-107 392.9 286 71.0
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 2.7e-107 392.5 273 72.5
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 6.0e-107 391.3 272 71.7
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 7.8e-107 391.0 273 72.2
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 7.8e-107 391.0 273 72.5
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 7.8e-107 391.0 250 74.4
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 2.3e-106 389.4 273 69.2
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 2.3e-106 389.4 303 64.7
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 8.7e-106 387.5 269 68.8
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 1.1e-105 387.1 269 70.3
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 1.9e-105 386.3 274 70.4
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 3.3e-105 385.6 271 68.6
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 3.3e-105 385.6 317 63.4
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 4.3e-105 385.2 269 69.9
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 3.1e-103 379.0 306 63.4
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.7e-101 373.2 274 67.2
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 1.1e-100 370.5 311 60.8
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 6.0e-99 364.8 270 66.3
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 1.5e-97 360.1 278 66.9
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.9e-97 359.8 270 66.3
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 9.6e-97 357.5 273 65.9
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 1.3e-96 357.1 283 65.7
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 6.2e-96 354.8 276 65.2
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 2.6e-94 349.4 223 75.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 3.5e-91 339.0 226 75.2
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 6.0e-91 338.2 267 64.4
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 5.1e-90 335.1 234 70.5
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 7.4e-89 331.3 208 80.3
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.3e-88 330.5 212 76.4
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 1.6e-88 330.1 219 74.0
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 3.1e-87 325.9 268 61.6
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 9.0e-87 324.3 254 63.0
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 2.3e-82 309.7 210 71.9
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 3.0e-82 309.3 228 71.1
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 8.2e-80 301.2 253 57.3
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 9.0e-79 297.7 260 55.4
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 6.9e-71 271.6 277 52.3
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 1.5e-70 270.4 226 67.3
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 5.7e-65 251.9 197 64.5
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 1.2e-62 244.2 216 56.0
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 1.5e-62 243.8 252 49.6
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 3.8e-61 239.2 156 74.4
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.3e-58 229.9 157 76.4
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 9.4e-52 208.0 154 70.8
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 2.0e-49 200.3 160 65.0
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 2.6e-49 199.9 237 47.7
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 5.7e-49 198.7 160 64.4
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 5.9e-46 188.7 150 62.0
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 1.2e-43 181.0 273 41.4
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 6.8e-42 175.3 260 37.3
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.6e-38 164.1 143 64.3
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 7.3e-20 102.1 58 75.9
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 1.6e-19 100.9 157 36.9
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 3.9e-13 79.7 69 56.5
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 1.1e-10 71.6 45 66.7
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 2.4e-07 60.5 56 53.6
CBR_g3150 Chara braunii HOM05D020303 ORTHO05D021299 6.0e-06 55.8 83 34.9


User provided reference genes

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