Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 8.1e-94 347.1 174 100.0
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 2.7e-89 332.0 183 94.0
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 4.5e-84 314.7 189 87.3
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 6.3e-70 267.7 195 74.4
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 2.6e-68 262.3 193 74.6
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 8.7e-64 247.3 190 68.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 9.4e-50 200.7 126 73.0
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 4.7e-49 198.4 123 76.4
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 4.7e-49 198.4 179 60.9
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 3.9e-48 195.3 160 60.6
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 5.2e-48 194.9 168 61.9
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 6.7e-48 194.5 171 60.2
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 8.8e-48 194.1 166 62.0
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.1e-47 193.7 171 57.3
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 1.5e-47 193.4 163 62.0
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.6e-47 192.6 127 70.9
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.3e-47 192.2 127 70.9
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 9.7e-47 190.7 158 59.5
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 9.7e-47 190.7 124 71.0
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 9.7e-47 190.7 136 67.6
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.3e-46 190.3 153 58.2
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 1.7e-46 189.9 162 61.1
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 2.2e-46 189.5 123 73.2
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 2.8e-46 189.1 137 65.0
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 2.8e-46 189.1 129 69.0
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 4.8e-46 188.3 127 74.0
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 8.2e-46 187.6 165 61.2
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 8.2e-46 187.6 165 61.2
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 8.2e-46 187.6 124 72.6
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 8.2e-46 187.6 146 66.4
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.1e-45 187.2 154 62.3
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 1.1e-45 187.2 139 65.5
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 1.8e-45 186.4 185 56.8
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 1.8e-45 186.4 122 69.7
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.8e-45 186.4 125 72.8
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.4e-45 186.0 148 60.8
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 3.1e-45 185.7 169 58.6
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 3.1e-45 185.7 185 55.1
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 3.1e-45 185.7 127 70.9
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 4.1e-45 185.3 127 67.7
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 4.1e-45 185.3 165 59.4
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 4.1e-45 185.3 128 68.0
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 4.1e-45 185.3 127 69.3
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 5.3e-45 184.9 161 59.0
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 5.3e-45 184.9 124 67.7
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 7.0e-45 184.5 151 62.9
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 7.0e-45 184.5 129 69.8
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 7.0e-45 184.5 152 59.9
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.2e-44 183.7 125 71.2
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 1.2e-44 183.7 149 60.4
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.6e-44 183.3 167 59.9
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.6e-44 183.3 129 65.1
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 2.0e-44 183.0 169 59.2
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.0e-44 183.0 122 70.5
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.6e-44 182.6 164 59.1
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.5e-44 182.2 172 59.3
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 3.5e-44 182.2 139 65.5
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 4.5e-44 181.8 153 59.5
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 5.9e-44 181.4 123 70.7
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.9e-44 181.4 125 70.4
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 7.7e-44 181.0 172 58.7
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 1.0e-43 180.6 127 70.1
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.7e-43 179.9 119 68.9
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 2.2e-43 179.5 123 68.3
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 2.9e-43 179.1 109 76.1
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 3.8e-43 178.7 137 65.0
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 5.0e-43 178.3 147 61.2
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 5.0e-43 178.3 123 69.9
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 5.0e-43 178.3 149 59.1
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 6.5e-43 177.9 127 66.1
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 6.5e-43 177.9 167 53.9
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 8.5e-43 177.6 143 64.3
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 8.5e-43 177.6 127 65.4
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 1.1e-42 177.2 172 55.8
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 1.5e-42 176.8 172 56.4
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 1.5e-42 176.8 172 56.4
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 1.5e-42 176.8 172 56.4
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.9e-42 176.4 123 69.9
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.5e-42 176.0 152 53.3
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 4.2e-42 175.3 124 68.5
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 4.2e-42 175.3 172 57.0
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 4.2e-42 175.3 126 68.3
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 1.6e-41 173.3 132 62.1
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 3.6e-41 172.2 175 56.6
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 3.6e-41 172.2 137 63.5
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 3.6e-41 172.2 121 71.1
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 4.7e-41 171.8 173 56.1
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 4.7e-41 171.8 175 52.6
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 4.7e-41 171.8 142 62.0
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 4.7e-41 171.8 124 66.1
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 4.7e-41 171.8 125 63.2
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.0e-40 170.6 161 53.4
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 3.0e-40 169.1 131 63.4
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.7e-40 167.9 118 66.9
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 8.8e-40 167.5 143 60.8
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 4.1e-37 158.7 131 59.5
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 7.0e-37 157.9 116 60.3
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 4.5e-36 155.2 100 69.0
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 1.2e-33 147.1 119 57.1
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.3e-32 142.9 130 50.8
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 3.5e-28 129.0 111 61.3
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 3.5e-28 129.0 111 61.3
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 3.5e-28 129.0 111 61.3
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.6e-25 120.2 81 65.4
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 1.0e-24 117.5 166 39.8
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 1.8e-24 116.7 81 71.6
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 8.9e-24 114.4 106 61.3
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 4.4e-23 112.1 115 50.4
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 9.8e-23 110.9 157 40.8
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 3.8e-19 99.0 124 43.5
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 4.0e-16 89.0 114 38.6
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.2e-14 83.2 46 76.1
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.9e-14 82.8 70 61.4
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 1.2e-09 67.4 50 56.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 2.8e-09 66.2 122 39.3


User provided reference genes

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