Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g012090.4 Solanum lycopersicum HOM05D005225 ORTHO05D006830 1.4e-248 862.4 422 100.0
Sopen05g006880 Solanum pennellii HOM05D005225 ORTHO05D006830 2.5e-242 841.6 418 98.8
PGSC0003DMG400028362 Solanum tuberosum HOM05D005225 ORTHO05D006830 1.0e-235 819.7 418 95.7
CAN.G707.21 Capsicum annuum HOM05D005225 ORTHO05D006830 7.2e-229 797.0 418 92.6
Peaxi162Scf00175g00052 Petunia axillaris HOM05D005225 ORTHO05D006830 1.3e-209 733.0 396 89.6
Nitab4.5_0000231g0060 Nicotiana tabacum HOM05D005225 ORTHO05D006830 1.3e-190 669.8 351 91.7
Dinv34052 Davidia involucrata HOM05D005225 ORTHO05D006830 1.7e-190 669.5 418 78.0
Cfa008863 Carpinus fangiana HOM05D005225 ORTHO05D006830 8.6e-190 667.2 418 76.3
Nitab4.5_0007734g0040 Nicotiana tabacum HOM05D005225 ORTHO05D006830 8.6e-190 667.2 351 92.0
RcHm_v2.0_Chr7g0212391 Rosa chinensis HOM05D005225 ORTHO05D006830 1.6e-188 662.9 418 75.6
Cc11_g11810 Coffea canephora HOM05D005225 ORTHO05D006830 1.2e-186 656.8 420 74.0
Sabra08G0073600 Salix brachista HOM05D005225 ORTHO05D006830 7.5e-186 654.1 418 74.6
Haze_11886 Corylus avellana HOM05D005225 ORTHO05D006830 1.7e-185 652.9 390 79.5
Potri.008G097400 Populus trichocarpa HOM05D005225 ORTHO05D006830 3.7e-185 651.7 418 74.6
Ciclev10031260m.g Citrus clementina HOM05D005225 ORTHO05D006830 4.9e-185 651.4 418 74.2
QL03p073750 Quercus lobata HOM05D005225 ORTHO05D006830 3.2e-184 648.7 418 73.9
Nn8g41224 Nelumbo nucifera HOM05D005225 ORTHO05D006830 5.4e-184 647.9 418 73.7
Atru.chr11.1603 Acer truncatum HOM05D005225 ORTHO05D006830 7.0e-184 647.5 418 74.2
FvH4_4g10620 Fragaria vesca HOM05D005225 ORTHO05D006830 1.2e-183 646.7 418 73.4
FAN12G0824 Fragaria x ananassa HOM05D005225 ORTHO05D006830 2.0e-183 646.0 418 73.4
Prupe.1G566200 Prunus persica HOM05D005225 ORTHO05D006830 3.5e-183 645.2 418 73.4
CSS0003869 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 7.8e-183 644.0 419 74.2
FAN12G2267 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.7e-182 642.9 418 73.2
QL02p092646 Quercus lobata HOM05D005225 ORTHO05D006830 3.0e-182 642.1 418 73.0
Thecc.02G327800 Theobroma cacao HOM05D005225 ORTHO05D006830 5.0e-182 641.3 418 72.2
Duzib251G0330 Durio zibethinus HOM05D005225 ORTHO05D006830 7.3e-181 637.5 418 71.5
Hma1.2p1_0051F.1_g029440 Hydrangea macrophylla HOM05D005225 ORTHO05D006830 9.5e-181 637.1 419 72.6
MD16G1281400 Malus domestica HOM05D005225 ORTHO05D006830 9.5e-181 637.1 390 77.2
COL.COLO4_27858 Corchorus olitorius HOM05D005225 ORTHO05D006830 1.2e-180 636.7 391 76.5
Rhsim09G0126000 Rhododendron simsii HOM05D005225 ORTHO05D006830 2.8e-180 635.6 405 74.8
Manes.10G001000 Manihot esculenta HOM05D005225 ORTHO05D006830 6.2e-180 634.4 418 72.0
vmacro01311 Vaccinium macrocarpon HOM05D005225 ORTHO05D006830 4.0e-179 631.7 389 76.6
Lalb_Chr04g0255551 Lupinus albus HOM05D005225 ORTHO05D006830 1.2e-178 630.2 410 73.7
PGR102G0586 Punica granatum HOM05D005225 ORTHO05D006830 5.8e-178 627.9 418 72.5
Eucgr.F03034 Eucalyptus grandis HOM05D005225 ORTHO05D006830 1.7e-177 626.3 419 72.1
HanXRQChr12g0375111 Helianthus annuus HOM05D005225 ORTHO05D006830 3.7e-177 625.2 418 71.1
Gorai.008G176100 Gossypium raimondii HOM05D005225 ORTHO05D006830 6.4e-177 624.4 418 71.1
Lj3P1029T28 Lonicera japonica HOM05D005225 ORTHO05D006830 1.4e-176 623.2 388 76.8
Medtr5g044980 Medicago truncatula HOM05D005225 ORTHO05D006830 1.9e-176 622.9 394 75.1
CANSAT80G1664 Cannabis sativa HOM05D005225 ORTHO05D006830 3.2e-176 622.1 416 70.0
DCAR_004043 Daucus carota HOM05D005225 ORTHO05D006830 4.1e-176 621.7 376 78.5
PSO017G1582 Papaver somniferum HOM05D005225 ORTHO05D006830 5.4e-176 621.3 419 71.4
arahy.Tifrunner.gnm1.ann1.1IY8V2 Arachis hypogaea HOM05D005225 ORTHO05D006830 2.7e-175 619.0 403 72.2
Cpa.g.sc1.153 Carica papaya HOM05D005225 ORTHO05D006830 3.5e-175 618.6 391 75.2
Sed0018680 Sechium edule HOM05D005225 ORTHO05D006830 3.5e-175 618.6 390 74.4
arahy.Tifrunner.gnm1.ann1.BAL663 Arachis hypogaea HOM05D005225 ORTHO05D006830 4.6e-175 618.2 403 72.2
VMungo1215G0332 Vigna mungo HOM05D005225 ORTHO05D006830 6.0e-175 617.8 394 74.1
arahy.Tifrunner.gnm1.ann1.BYWX90 Arachis hypogaea HOM05D005225 ORTHO05D006830 1.0e-174 617.1 403 71.7
arahy.Tifrunner.gnm1.ann1.W47LMS Arachis hypogaea HOM05D005225 ORTHO05D006830 1.0e-174 617.1 403 71.7
Hund25165 Selenicereus undatus HOM05D005225 ORTHO05D006830 3.9e-174 615.1 419 69.5
TWI79G0826 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 3.9e-174 615.1 418 69.4
CsaV3_5G008630 Cucumis sativus L. HOM05D005225 ORTHO05D006830 8.6e-174 614.0 419 70.4
Lsat_1_v5_gn_3_53701 Lactuca sativa HOM05D005225 ORTHO05D006830 1.2e-172 610.1 418 68.9
MBI16_g03095_MAGBIO Magnolia biondii HOM05D005225 ORTHO05D006830 1.2e-172 610.1 421 71.0
MELO3C020077.2 Cucumis melo HOM05D005225 ORTHO05D006830 1.6e-172 609.8 388 74.7
TWI75G0045 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 2.8e-172 609.0 418 69.1
ClCG11G000950 Citrullus lanatus HOM05D005225 ORTHO05D006830 3.6e-172 608.6 383 74.7
Ca_05000_v3 Cicer arietinum L. HOM05D005225 ORTHO05D006830 6.2e-172 607.8 396 72.0
Lj2g0003273 Lotus japonicus HOM05D005225 ORTHO05D006830 6.2e-172 607.8 394 72.6
Glyma.02G120400 Glycine max HOM05D005225 ORTHO05D006830 8.1e-172 607.4 397 73.6
TPR.G23155 Trifolium pratense HOM05D005225 ORTHO05D006830 1.1e-171 607.1 394 73.9
ECA246G3793 Erigeron canadensis HOM05D005225 ORTHO05D006830 1.4e-171 606.7 418 69.1
Sc04g0007480 Simmondsia chinensis HOM05D005225 ORTHO05D006830 1.4e-171 606.7 418 68.9
HanXRQChr03g0092011 Helianthus annuus HOM05D005225 ORTHO05D006830 2.4e-171 605.9 420 69.5
AUR62003082 Chenopodium quinoa HOM05D005225 ORTHO05D006830 3.1e-171 605.5 418 68.4
Migut.L01174 Erythranthe guttata HOM05D005225 ORTHO05D006830 3.1e-171 605.5 419 66.8
Psat2g131720 Pisum sativum HOM05D005225 ORTHO05D006830 3.1e-171 605.5 394 73.1
TPR.G23738 Trifolium pratense HOM05D005225 ORTHO05D006830 7.6e-170 600.9 394 73.6
MSTRG.7736 Avicennia marina HOM05D005225 ORTHO05D006830 1.3e-169 600.1 418 68.7
SalBow2G3373 Salvia bowleyana HOM05D005225 ORTHO05D006830 2.9e-169 599.0 418 67.5
Ah.03g138790 Amaranthus hybridus HOM05D005225 ORTHO05D006830 4.1e-168 595.1 422 67.5
GSVIVG01012238001 Vitis vinifera HOM05D005225 ORTHO05D006830 5.4e-168 594.7 418 68.9
EL10Ac6g15018 Beta vulgaris HOM05D005225 ORTHO05D006830 3.5e-167 592.0 393 71.5
Lalb_Chr10g0098931 Lupinus albus HOM05D005225 ORTHO05D006830 6.2e-164 581.3 403 71.0
Aa31LG2G20560 Aethionema arabicum HOM05D005225 ORTHO05D006830 6.9e-163 577.8 388 68.8
AT4G30000 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 2.0e-162 576.2 398 67.6
AL7G22240 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 4.4e-162 575.1 398 67.3
Carub.0007s1065 Capsella rubella HOM05D005225 ORTHO05D006830 2.9e-161 572.4 391 67.5
BraA01t00759Z Brassica rapa HOM05D005225 ORTHO05D006830 6.4e-161 571.2 391 67.5
THA.LOC104821999 Tarenaya hassleriana HOM05D005225 ORTHO05D006830 6.4e-161 571.2 415 66.0
Os07g0618500 Oryza sativa ssp. japonica HOM05D005225 ORTHO05D006830 8.4e-161 570.9 404 66.3
A01p08120 Brassica napus HOM05D005225 ORTHO05D006830 1.9e-160 569.7 401 66.6
CARHR237920 Cardamine hirsuta HOM05D005225 ORTHO05D006830 1.9e-160 569.7 399 66.9
CiPaw.06G093200 Carya illinoinensis HOM05D005225 ORTHO05D006830 3.2e-160 568.9 351 75.5
Sp7g27800 Schrenkiella parvula HOM05D005225 ORTHO05D006830 3.2e-160 568.9 407 65.6
Gohir.A12G160100 Gossypium hirsutum HOM05D005225 ORTHO05D006830 1.2e-159 567.0 418 65.8
SEGI_35565 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 1.2e-159 567.0 388 67.8
Thhalv10024845m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 1.6e-159 566.6 388 68.3
unitig_22.g6894 Utricularia gibba HOM05D005225 ORTHO05D006830 1.6e-159 566.6 404 64.6
ATR0827G107 Amborella trichopoda HOM05D005225 ORTHO05D006830 1.3e-158 563.5 384 70.8
Aqoxy6G03037 Aquilegia oxysepala HOM05D005225 ORTHO05D006830 3.0e-158 562.4 351 74.1
BcaC09g51778 Brassica carinata HOM05D005225 ORTHO05D006830 1.5e-157 560.1 382 67.8
C01p09090 Brassica napus HOM05D005225 ORTHO05D006830 1.5e-157 560.1 382 67.8
BolC1t00900H Brassica oleracea HOM05D005225 ORTHO05D006830 1.5e-157 560.1 382 67.8
Gohir.D12G163500 Gossypium hirsutum HOM05D005225 ORTHO05D006830 3.3e-157 558.9 418 65.1
CSS0031076 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 1.4e-155 553.5 370 72.4
Oeu055095.2 Olea europaea HOM05D005225 ORTHO05D006830 6.9e-155 551.2 351 74.4
Thhalv10019460m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 2.0e-154 549.7 377 69.0
AT1G69190 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 1.7e-153 546.6 379 68.6
Zm00001eb319990 Zea mays HOM05D005225 ORTHO05D006830 2.9e-153 545.8 384 66.1
TAR629G1144 Trochodendron aralioides HOM05D005225 ORTHO05D006830 1.2e-151 540.4 418 65.6
HPP92_017786 Vanilla planifolia HOM05D005225 ORTHO05D006830 1.2e-151 540.4 405 64.9
Sp5g24250 Schrenkiella parvula HOM05D005225 ORTHO05D006830 1.6e-151 540.0 378 67.7
FAN17G1346 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.5e-146 523.5 316 77.8
SGA_v2.0_scaffold85G26791 Striga asiatica HOM05D005225 ORTHO05D006830 1.7e-145 520.0 385 65.7
AL2G28280 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 1.0e-142 510.8 364 66.2
SHI01330 Sapria himalayana HOM05D005225 ORTHO05D006830 2.1e-140 503.1 380 65.0
Aa31sc367G20 Aethionema arabicum HOM05D005225 ORTHO05D006830 1.4e-139 500.4 378 63.8
FAN07G1983 Fragaria x ananassa HOM05D005225 ORTHO05D006830 5.5e-136 488.4 297 76.8
AagrBONN_evm.TU.Sc2ySwM_362.716 Anthoceros agrestis HOM05D005225 ORTHO05D006830 1.1e-131 474.2 392 57.9
MD06G1024100 Malus domestica HOM05D005225 ORTHO05D006830 2.2e-129 466.5 351 65.0
Actinidia00572 Actinidia chinensis HOM05D005225 ORTHO05D006830 5.0e-129 465.3 389 63.0
Mapoly0021s0079 Marchantia polymorpha HOM05D005225 ORTHO05D006830 1.4e-128 463.8 395 57.0
SEGI_04122 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 3.2e-128 462.6 388 58.0
Pp3c27_4310 Physcomitrium patens HOM05D005225 ORTHO05D006830 6.7e-126 454.9 377 57.8
CDE04G0587 Ceratophyllum demersum HOM05D005225 ORTHO05D006830 7.9e-119 431.4 309 67.3
SMO358G0268 Selaginella moellendorffii HOM05D005225 ORTHO05D006830 1.1e-117 427.6 377 54.9
HanXRQChr04g0120931 Helianthus annuus HOM05D005225 ORTHO05D006830 2.5e-104 383.3 250 72.0
Nn2g15478 Nelumbo nucifera HOM05D005225 ORTHO05D006830 6.1e-103 378.6 237 74.3
AUR62007898 Chenopodium quinoa HOM05D005225 ORTHO05D006830 6.7e-102 375.2 253 70.0
RcHm_v2.0_Chr2g0139541 Rosa chinensis HOM05D005225 ORTHO05D006830 2.0e-101 373.6 228 77.6
Glyma.01G062200 Glycine max HOM05D005225 ORTHO05D006830 1.7e-100 370.5 256 69.5
CBR_g61480 Chara braunii HOM05D005225 ORTHO05D006830 9.4e-96 354.8 376 48.9
SGA_v2.0_scaffold45G17115 Striga asiatica HOM05D001733 ORTHO05D001882 8.3e-92 341.7 272 62.9
Phvul.001G131450 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 1.5e-85 320.9 206 73.8
Phvul.007G262101 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 5.7e-85 318.9 206 73.3
MCO11G893 Micromonas commoda HOM05D005225 ORTHO05D006830 6.3e-84 315.5 453 41.5
Cre10.g428550 Chlamydomonas reinhardtii HOM05D005225 ORTHO05D006830 5.9e-82 308.9 479 39.2
PRCOL_00003253 Prasinoderma coloniale HOM05D005225 ORTHO05D006830 4.7e-71 272.7 366 43.4
Nn4g23480 Nelumbo nucifera HOM05D005225 ORTHO05D006830 3.4e-69 266.5 155 79.4
Cfa024768 Carpinus fangiana HOM05D005225 ORTHO05D124687 1.6e-63 247.7 387 39.0
LjContig00272g0016968 Lotus japonicus HOM05D005225 ORTHO05D006830 1.6e-55 221.1 213 53.1
SGA_v2.0_scaffold16G07808 Striga asiatica HOM05D005225 ORTHO05D006830 2.3e-49 200.7 240 47.5
RcHm_v2.0_Chr2g0139531 Rosa chinensis HOM05D005225 ORTHO05D006830 2.6e-45 187.2 175 56.6
Nn4g23481 Nelumbo nucifera HOM05D005225 ORTHO05D006830 9.9e-37 158.7 108 75.0
Actinidia16153 Actinidia chinensis HOM05D005225 ORTHO05D006830 2.1e-31 141.0 133 56.4
HanXRQChr15g0477151 Helianthus annuus HOM05D005225 ORTHO05D044060 1.2e-29 135.2 96 69.8
AUR62007899 Chenopodium quinoa HOM05D005225 ORTHO05D044060 6.9e-22 109.4 76 65.8
QL06p011620 Quercus lobata HOM05D005225 ORTHO05D006830 5.8e-21 106.3 68 77.9
TAR371G0727 Trochodendron aralioides HOM05D005225 ORTHO05D006830 4.9e-20 103.2 79 64.6
HanXRQChr04g0120941 Helianthus annuus HOM05D005225 ORTHO05D048239 6.5e-20 102.8 59 74.6
SGA_v2.0_scaffold16G07809 Striga asiatica HOM05D005225 ORTHO05D048239 1.2e-18 98.6 75 62.7
Medtr0076s0050 Medicago truncatula HOM05D005225 ORTHO05D265034 1.6e-18 98.2 90 56.7
Thecc.02G327500 Theobroma cacao HOM05D005225 ORTHO05D407879 1.8e-06 58.2 36 72.2


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