Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 6.7e-105 384.0 195 100.0
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 5.9e-101 370.9 195 97.4
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 2.1e-98 362.5 195 94.9
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 1.2e-85 320.1 196 84.7
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 6.1e-82 307.8 197 79.7
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 5.2e-81 304.7 197 78.7
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 1.3e-79 300.1 197 79.2
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 7.7e-77 290.8 197 77.7
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 5.0e-76 288.1 197 78.2
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 3.5e-61 238.8 200 61.5
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 1.1e-59 233.8 199 62.3
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 3.3e-59 232.3 199 62.8
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 2.8e-58 229.2 198 61.6
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.8e-57 226.5 195 57.9
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 3.1e-57 225.7 199 62.3
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 5.2e-57 224.9 199 57.8
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 2.0e-56 223.0 198 59.6
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 2.6e-56 222.6 197 59.9
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 7.5e-56 221.1 200 60.0
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 9.8e-56 220.7 195 56.9
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.3e-55 220.3 196 57.1
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 6.4e-55 218.0 200 60.0
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 8.3e-55 217.6 197 57.4
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 2.4e-54 216.1 202 60.4
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 2.4e-54 216.1 197 58.9
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 5.4e-54 214.9 202 56.9
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 7.0e-54 214.5 198 56.1
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 9.2e-54 214.2 200 60.0
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 1.2e-53 213.8 197 56.3
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 2.0e-53 213.0 199 59.3
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 3.5e-53 212.2 199 59.3
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 4.6e-53 211.8 194 59.8
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 7.8e-53 211.1 202 58.4
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 1.3e-52 210.3 201 57.7
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 1.3e-52 210.3 197 54.8
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.7e-52 209.9 197 60.4
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 1.7e-52 209.9 198 58.1
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 3.0e-52 209.1 196 59.2
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 3.0e-52 209.1 199 56.8
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 3.0e-52 209.1 200 58.0
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 8.6e-52 207.6 199 56.8
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 1.1e-51 207.2 198 56.6
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 1.1e-51 207.2 195 57.9
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 2.5e-51 206.1 198 57.6
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 9.5e-51 204.1 197 56.3
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.2e-50 203.8 198 56.6
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 1.2e-50 203.8 210 54.3
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 2.1e-50 203.0 195 54.4
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 4.7e-50 201.8 233 50.6
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 6.2e-50 201.4 218 54.1
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 1.1e-49 200.7 196 56.1
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 3.1e-49 199.1 202 53.5
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 8.9e-49 197.6 218 53.2
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 8.9e-49 197.6 195 54.4
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.2e-48 197.2 195 55.9
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.0e-48 196.4 195 52.8
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 2.6e-48 196.1 201 53.2
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.6e-48 196.1 201 54.7
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.6e-48 196.1 216 52.3
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 2.6e-48 196.1 199 53.8
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 5.8e-48 194.9 196 54.6
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 5.8e-48 194.9 202 55.0
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 1.7e-47 193.4 196 56.1
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 2.2e-47 193.0 194 54.6
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 1.1e-46 190.7 195 53.8
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 1.4e-46 190.3 196 55.6
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 7.1e-46 188.0 213 48.8
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.7e-44 183.3 202 51.5
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 2.3e-44 183.0 202 53.0
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 1.1e-43 180.6 195 51.3
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 4.3e-43 178.7 198 52.5
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.2e-42 177.2 195 52.3
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 2.8e-42 176.0 195 49.7
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 4.7e-42 175.3 195 49.7
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 5.2e-41 171.8 202 47.5
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 5.2e-41 171.8 199 51.8
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 2.0e-40 169.9 195 48.7
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.7e-37 159.5 199 44.2
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 4.6e-37 158.7 140 61.4
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 1.2e-34 150.6 198 44.9
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 9.0e-33 144.4 199 43.2
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 9.9e-32 141.0 137 53.3
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 7.1e-30 134.8 204 42.2
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 6.0e-29 131.7 211 39.3
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.7e-28 130.2 194 39.2
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.9e-27 126.7 212 39.2
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.1e-25 120.9 110 52.7
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 5.3e-25 118.6 112 48.2
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 5.8e-24 115.2 108 49.1
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 4.6e-21 105.5 94 57.4
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.9e-20 102.4 172 36.6
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 9.6e-19 97.8 102 44.1
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.6e-18 97.1 193 34.2
Actinidia31922 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.1e-17 94.4 57 75.4
Solyc01g081280.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.4e-17 94.0 51 86.3
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.8e-17 93.6 102 41.2
Sabra10G0104900 Salix brachista HOM05D006847 ORTHO05D008685 1.5e-16 90.5 103 50.5
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 2.6e-16 89.7 107 39.3
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 3.8e-15 85.9 102 40.2
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.1e-14 84.3 78 56.4
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 7.1e-14 81.6 138 40.6
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 2.1e-10 70.1 66 50.0
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 6.9e-09 65.1 95 38.9


User provided reference genes

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