Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 6.5e-44 180.3 86 100.0
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 7.0e-22 107.1 64 81.2
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 3.8e-20 101.3 86 61.6
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 1.5e-19 99.4 86 64.0
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 2.3e-17 92.0 86 59.3
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 2.3e-17 92.0 84 65.5
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 2.6e-16 88.6 88 61.4
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 6.3e-15 84.0 86 54.7
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 4.1e-14 81.3 89 52.8
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 7.0e-14 80.5 87 56.3
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 3.5e-13 78.2 89 57.3
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.3e-12 76.3 89 49.4
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 1.3e-12 76.3 91 50.5
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 1.7e-12 75.9 88 55.7
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 2.9e-12 75.1 71 53.5
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 3.8e-12 74.7 88 50.0
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 5.0e-12 74.3 80 51.2
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 6.6e-12 73.9 86 53.5
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 6.6e-12 73.9 91 52.7
Migut.E00334 Erythranthe guttata HOM05D008456 ORTHO05D010229 1.1e-11 73.2 84 48.8
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.5e-11 72.8 86 52.3
Migut.L01069 Erythranthe guttata HOM05D008456 ORTHO05D010229 1.5e-11 72.8 60 60.0
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 2.5e-11 72.0 82 51.2
Oeu014305.1 Olea europaea HOM05D000497 ORTHO05D002300 2.5e-11 72.0 85 56.5
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 4.2e-11 71.2 91 50.5
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 5.5e-11 70.9 71 54.9
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 1.6e-10 69.3 86 46.5
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 2.8e-10 68.6 94 45.7
Rhsim09G0108500 Rhododendron simsii HOM05D000497 ORTHO05D002300 1.0e-09 66.6 57 68.4
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 1.4e-09 66.2 87 47.1
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.8e-09 65.9 87 48.3
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.3e-09 65.5 90 45.6
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 5.2e-09 64.3 83 47.0
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 5.2e-09 64.3 60 56.7
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 6.8e-09 63.9 99 41.4
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.2e-08 63.2 90 45.6
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 1.2e-08 63.2 90 45.6
unitig_22.g5569 Utricularia gibba HOM05D008456 ORTHO05D010229 2.0e-08 62.4 74 48.6
Glyma.20G115200 Glycine max HOM05D008456 ORTHO05D010229 2.6e-08 62.0 115 39.1
HanXRQChr16g0529291 Helianthus annuus HOM05D008456 ORTHO05D010229 1.3e-07 59.7 73 47.9
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 1.3e-07 59.7 86 44.2
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 2.2e-07 58.9 92 46.7
Lj6C759T21 Lonicera japonica HOM05D000497 ORTHO05D002300 8.3e-07 57.0 68 55.9
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 8.3e-07 57.0 63 50.8
TAR622G0689 Trochodendron aralioides HOM05D008456 ORTHO05D010229 8.3e-07 57.0 63 52.4
CiPaw.03G230800 Carya illinoinensis HOM05D008456 ORTHO05D010229 5.4e-06 54.3 118 36.4


User provided reference genes

Program Settings