Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g007700.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 5.4e-36 153.7 71 100.0
Solyc11g017210.3 Solanum lycopersicum HOM05D000045 ORTHO05D000611 4.3e-33 144.1 85 83.5
Solyc02g092170.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 3.6e-32 141.0 85 82.4
Solyc03g113110.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 1.8e-31 138.7 85 81.2
Solyc06g054040.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 4.0e-31 137.5 85 81.2
Solyc02g150118.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.0e-26 120.6 77 79.2
Solyc03g094125.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.0e-26 120.6 77 79.2
Solyc03g150148.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.0e-26 120.6 77 79.2
Solyc04g070995.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.0e-26 120.6 77 79.2
Solyc04g071265.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.0e-26 120.6 77 79.2
Solyc04g072045.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.0e-26 120.6 77 79.2
Solyc10g044585.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.0e-26 120.6 77 79.2
Solyc11g020215.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 5.0e-26 120.6 77 79.2
Solyc03g082435.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 1.5e-25 119.0 77 77.9
Solyc05g009583.1 Solanum lycopersicum HOM05D000045 ORTHO05D000611 9.5e-25 116.3 77 76.6
Peaxi162Scf00058g02913 Petunia axillaris HOM05D000045 ORTHO05D000067 1.2e-16 89.4 70 67.1
Peaxi162Scf00094g01124 Petunia axillaris HOM05D000045 ORTHO05D000611 5.2e-15 84.0 68 63.2
CAN.G273.11 Capsicum annuum HOM05D000045 ORTHO05D019408 8.9e-15 83.2 70 61.4
Peaxi162Scf00066g02121 Petunia axillaris HOM05D000045 ORTHO05D000611 2.6e-14 81.6 76 55.3
Peaxi162Scf00249g00025 Petunia axillaris HOM05D000045 ORTHO05D000611 2.6e-14 81.6 76 55.3
CAN.G386.1 Capsicum annuum HOM05D000045 ORTHO05D000611 9.9e-14 79.7 76 53.9
Peaxi162Scf00036g00419 Petunia axillaris HOM05D000045 ORTHO05D000611 1.7e-13 79.0 69 58.0
CAN.G546.44 Capsicum annuum HOM05D004173 ORTHO05D004885 2.2e-13 78.6 76 52.6
CAN.G1238.28 Capsicum annuum HOM05D000045 ORTHO05D000611 3.7e-13 77.8 71 56.3
CAN.G660.2 Capsicum annuum HOM05D000045 ORTHO05D000067 3.7e-13 77.8 42 78.6
Peaxi162Scf00954g00114 Petunia axillaris HOM05D000045 ORTHO05D000611 4.9e-13 77.4 68 58.8
Peaxi162Scf00771g00216 Petunia axillaris HOM05D000045 ORTHO05D000611 4.1e-12 74.3 76 51.3
Peaxi162Scf00001g04119 Petunia axillaris HOM05D000045 ORTHO05D000067 7.8e-11 70.1 64 54.7
CAN.G410.1 Capsicum annuum HOM05D000045 ORTHO05D000611 1.0e-10 69.7 82 43.9
CAN.G322.112 Capsicum annuum HOM05D000045 ORTHO05D000611 2.3e-10 68.6 51 66.7
Peaxi162Scf00533g00037 Petunia axillaris HOM05D000045 ORTHO05D000611 3.0e-10 68.2 76 47.4
Peaxi162Scf00574g00712 Petunia axillaris HOM05D000045 ORTHO05D000611 5.1e-10 67.4 56 57.1
Peaxi162Scf00072g00811 Petunia axillaris HOM05D000045 ORTHO05D000611 6.6e-10 67.0 64 53.1
CAN.G268.20 Capsicum annuum HOM05D000045 ORTHO05D000611 1.9e-09 65.5 59 57.6
CAN.G379.28 Capsicum annuum HOM05D000045 ORTHO05D000611 3.3e-09 64.7 63 54.0
COL.COLO4_19282 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.1e-07 59.7 63 49.2
COL.COLO4_20785 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.1e-07 59.7 63 49.2
COL.COLO4_25133 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.1e-07 59.7 63 49.2
COL.COLO4_24493 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.8e-07 58.9 63 49.2
Sed0018311 Sechium edule HOM05D000045 ORTHO05D000611 5.2e-07 57.4 59 49.2
Ciclev10016736m.g Citrus clementina HOM05D000045 ORTHO05D000611 8.9e-07 56.6 69 43.5
MD04G1041900 Malus domestica HOM05D000045 ORTHO05D000611 1.2e-06 56.2 62 48.4
TAR365G0744 Trochodendron aralioides HOM05D000045 ORTHO05D000611 1.2e-06 56.2 62 48.4
COL.COLO4_07681 Corchorus olitorius HOM05D000045 ORTHO05D000611 1.5e-06 55.8 62 46.8
Gohir.D10G128500 Gossypium hirsutum HOM05D000045 ORTHO05D000611 1.5e-06 55.8 62 48.4
Gorai.011G141900 Gossypium raimondii HOM05D000045 ORTHO05D000611 1.5e-06 55.8 62 48.4
QL10p049195 Quercus lobata HOM05D000045 ORTHO05D000611 1.5e-06 55.8 62 46.8
Atru.chr6.3531 Acer truncatum HOM05D000045 ORTHO05D000611 2.0e-06 55.5 69 42.0
Manes.04G043100 Manihot esculenta HOM05D000045 ORTHO05D000611 2.0e-06 55.5 59 45.8
QL10p049223 Quercus lobata HOM05D000045 ORTHO05D000611 2.0e-06 55.5 62 45.2
QL10p049227 Quercus lobata HOM05D000045 ORTHO05D000611 2.0e-06 55.5 62 45.2
TWI18G0887 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 2.0e-06 55.5 70 44.3
COL.COLO4_18552 Corchorus olitorius HOM05D000045 ORTHO05D000611 2.6e-06 55.1 63 46.0
COL.COLO4_18553 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.6e-06 55.1 63 46.0
MBI16_g37216_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 2.6e-06 55.1 60 45.0
RcHm_v2.0_Chr6g0282581 Rosa chinensis HOM05D000045 ORTHO05D000611 2.6e-06 55.1 59 47.5
Thecc.01G209300 Theobroma cacao HOM05D000045 ORTHO05D000611 2.6e-06 55.1 59 47.5
CSS0014478 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 3.4e-06 54.7 62 46.8
CSS0029224 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 3.4e-06 54.7 62 46.8
CiPaw.01G099500 Carya illinoinensis HOM05D000045 ORTHO05D000611 3.4e-06 54.7 69 46.4
CiPaw.13G058000 Carya illinoinensis HOM05D000045 ORTHO05D000611 3.4e-06 54.7 59 45.8
ClCG07G015710 Citrullus lanatus HOM05D000045 ORTHO05D000611 3.4e-06 54.7 59 49.2
CsaV3_4G003380 Cucumis sativus L. HOM05D000045 ORTHO05D000611 3.4e-06 54.7 59 49.2
Manes.12G059800 Manihot esculenta HOM05D000045 ORTHO05D000611 3.4e-06 54.7 66 43.9
Nn1g09625 Nelumbo nucifera HOM05D000045 ORTHO05D000611 3.4e-06 54.7 59 45.8
PSO675G9199 Papaver somniferum HOM05D000045 ORTHO05D000611 3.4e-06 54.7 79 35.4
QL09p047379 Quercus lobata HOM05D000045 ORTHO05D000611 3.4e-06 54.7 59 47.5
QL10p049186 Quercus lobata HOM05D000045 ORTHO05D000611 3.4e-06 54.7 59 49.2
Actinidia35982 Actinidia chinensis HOM05D000045 ORTHO05D000611 4.4e-06 54.3 62 46.8
Duzib138G0768 Durio zibethinus HOM05D000045 ORTHO05D000611 4.4e-06 54.3 59 49.2
Duzib211G0444 Durio zibethinus HOM05D000045 ORTHO05D000611 4.4e-06 54.3 59 49.2
Gohir.A07G158800 Gossypium hirsutum HOM05D000045 ORTHO05D000611 4.4e-06 54.3 59 49.2
Gohir.D07G167600 Gossypium hirsutum HOM05D000045 ORTHO05D000611 4.4e-06 54.3 59 49.2
Gorai.N002500 Gossypium raimondii HOM05D000045 ORTHO05D000611 4.4e-06 54.3 59 49.2
MBI02_g45021_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 4.4e-06 54.3 73 42.5
QL05p019474 Quercus lobata HOM05D000045 ORTHO05D000611 4.4e-06 54.3 59 47.5
COL.COLO4_08154 Corchorus olitorius HOM05D000045 ORTHO05D000611 5.8e-06 53.9 59 45.8
FvH4_2g17603 Fragaria vesca HOM05D000045 ORTHO05D000611 5.8e-06 53.9 59 47.5
Cfa010637 Carpinus fangiana HOM05D000045 ORTHO05D000611 7.6e-06 53.5 59 45.8
Duzib212G0671 Durio zibethinus HOM05D000045 ORTHO05D000611 7.6e-06 53.5 59 47.5
PSO339G5348 Papaver somniferum HOM05D000045 ORTHO05D000611 7.6e-06 53.5 60 46.7
PSO384G1440 Papaver somniferum HOM05D000045 ORTHO05D000611 7.6e-06 53.5 60 46.7
Peaxi162Scf00175g01033 Petunia axillaris HOM05D000045 ORTHO05D000067 7.6e-06 53.5 54 51.9
Atru.chr4.1192 Acer truncatum HOM05D000045 ORTHO05D000611 9.9e-06 53.1 62 45.2


User provided reference genes

Program Settings