Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 1.2e-186 656.4 342 100.0
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 7.7e-181 637.1 335 98.5
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 1.6e-173 612.8 335 94.6
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 6.1e-162 574.3 337 90.5
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 4.6e-157 558.1 336 86.6
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 4.0e-145 518.5 329 79.6
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.1e-141 506.1 301 90.0
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 3.5e-141 505.4 325 80.9
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 6.0e-141 504.6 261 100.0
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 3.3e-139 498.8 335 77.9
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 8.1e-138 494.2 336 75.9
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 1.4e-137 493.4 338 76.6
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.8e-137 493.0 330 76.7
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 9.9e-136 487.3 335 76.4
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 1.7e-135 486.5 329 76.6
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 6.4e-135 484.6 333 75.7
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 6.4e-135 484.6 330 75.5
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 8.4e-135 484.2 329 77.2
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 1.1e-134 483.8 335 75.8
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.1e-134 483.8 335 76.1
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 1.4e-134 483.4 372 69.6
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 4.1e-134 481.9 326 76.4
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 1.2e-133 480.3 329 73.6
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 2.1e-133 479.6 335 75.2
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.1e-133 479.6 335 74.9
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 4.6e-133 478.4 336 75.6
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 1.0e-132 477.2 336 72.9
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.0e-132 477.2 346 72.5
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 1.3e-132 476.9 336 73.8
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 6.6e-132 474.6 329 75.4
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 1.1e-131 473.8 334 73.4
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 7.3e-131 471.1 335 73.1
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 1.2e-130 470.3 333 73.0
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.2e-130 470.3 333 73.3
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 2.8e-130 469.2 330 73.9
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 6.2e-130 468.0 336 72.6
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 8.1e-130 467.6 333 71.5
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 1.8e-129 466.5 330 73.3
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 3.1e-129 465.7 326 73.9
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 6.9e-129 464.5 335 71.0
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 9.0e-129 464.2 326 73.6
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 9.0e-129 464.2 332 72.0
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 9.0e-129 464.2 336 70.5
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 2.6e-128 462.6 329 72.0
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 3.4e-128 462.2 333 72.1
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 4.4e-128 461.8 333 72.1
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 7.6e-128 461.1 340 71.2
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 7.6e-128 461.1 337 71.2
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 7.6e-128 461.1 337 71.2
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 7.6e-128 461.1 325 73.5
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 9.9e-128 460.7 328 73.2
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 1.7e-127 459.9 337 71.2
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 2.9e-127 459.1 329 72.0
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 4.9e-127 458.4 336 69.6
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 6.4e-127 458.0 340 70.9
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 6.4e-127 458.0 335 70.4
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 1.9e-126 456.4 340 70.0
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 2.4e-126 456.1 340 69.7
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 2.4e-126 456.1 328 72.0
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 4.2e-126 455.3 337 70.3
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 7.1e-126 454.5 340 70.3
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 9.3e-126 454.1 335 70.1
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 3.5e-125 452.2 334 69.8
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 4.6e-125 451.8 335 69.9
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 4.6e-125 451.8 335 72.2
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 6.0e-125 451.4 336 70.2
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 6.0e-125 451.4 334 70.1
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 1.0e-124 450.7 353 68.8
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.9e-123 446.4 321 70.7
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 3.3e-123 445.7 325 71.1
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 3.3e-123 445.7 321 70.7
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 9.6e-123 444.1 307 75.2
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 6.2e-122 441.4 338 67.2
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 8.1e-122 441.0 335 71.6
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 5.3e-121 438.3 346 67.9
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.5e-120 436.8 333 69.7
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.6e-117 426.8 323 70.6
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 3.5e-117 425.6 397 60.7
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 2.5e-115 419.5 325 67.7
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 6.2e-114 414.8 321 68.8
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 4.0e-113 412.1 330 67.3
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 3.0e-108 396.0 339 63.7
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 3.9e-108 395.6 334 65.9
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 8.7e-108 394.4 282 74.5
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.8e-105 386.7 335 64.5
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 2.5e-99 366.3 333 60.4
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 1.1e-97 360.9 340 59.7
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 1.8e-97 360.1 337 59.3
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.5e-96 357.1 341 55.4
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 2.2e-90 336.7 330 53.3
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 6.7e-84 315.1 321 51.1
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 1.7e-82 310.5 244 66.0
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 8.2e-82 308.1 205 78.0
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 9.1e-81 304.7 325 50.8
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.2e-80 304.3 197 77.7
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.9e-76 289.3 325 47.7
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 5.2e-76 288.9 183 80.9
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 3.0e-68 263.1 201 72.6
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 2.6e-67 260.0 373 46.4
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 7.5e-67 258.5 244 59.8
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 5.3e-65 252.3 332 46.1
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.7e-64 250.0 325 43.1
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 6.5e-63 245.4 352 39.8
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.2e-61 241.1 178 70.2
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 1.2e-59 234.6 149 80.5
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.2e-45 188.0 304 42.8
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.8e-45 186.8 299 42.8
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 6.1e-45 185.7 170 51.8
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 8.3e-42 175.3 125 74.4
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 1.5e-38 164.5 334 33.2
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 7.5e-35 152.1 124 63.7
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.7e-31 141.0 89 77.5
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.2e-21 108.2 76 67.1
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 2.2e-18 97.4 319 28.5
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.8e-13 80.5 59 67.8
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 4.3e-06 56.6 69 50.7
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 4.3e-06 56.6 69 50.7
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 7.3e-06 55.8 35 77.1


User provided reference genes

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