Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 7.8e-101 370.5 198 100.0
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 7.3e-99 364.0 198 98.0
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 1.5e-88 329.7 204 90.7
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 8.4e-79 297.4 222 74.8
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 6.9e-65 251.1 159 86.8
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.5e-64 250.0 159 86.2
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 2.0e-56 223.0 202 65.3
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 9.3e-54 214.2 199 62.8
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 2.1e-53 213.0 202 62.4
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 1.3e-52 210.3 198 63.1
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.8e-52 209.9 191 64.4
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 6.7e-52 208.0 196 62.8
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 8.7e-52 207.6 202 61.9
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 1.9e-51 206.5 195 61.5
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 1.9e-51 206.5 192 62.5
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 3.3e-51 205.7 201 62.7
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 5.7e-51 204.9 186 65.1
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 1.6e-50 203.4 196 62.2
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 3.7e-50 202.2 166 69.3
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 4.8e-50 201.8 199 60.3
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 8.2e-50 201.1 184 64.7
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 1.1e-49 200.7 153 71.9
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 1.1e-49 200.7 133 79.7
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 1.8e-49 199.9 203 56.7
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.4e-49 199.5 164 69.5
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 3.1e-49 199.1 166 66.9
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 4.1e-49 198.7 142 75.4
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 2.6e-48 196.1 171 67.3
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 7.7e-48 194.5 138 75.4
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 1.0e-47 194.1 113 88.5
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.3e-47 193.7 207 60.9
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 1.3e-47 193.7 132 80.3
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 1.3e-47 193.7 204 59.8
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 1.7e-47 193.4 197 60.9
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 2.2e-47 193.0 138 74.6
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 2.9e-47 192.6 205 58.0
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 2.9e-47 192.6 126 83.3
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 3.8e-47 192.2 207 60.4
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 3.8e-47 192.2 158 69.0
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 3.8e-47 192.2 181 63.0
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 3.8e-47 192.2 207 62.8
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 8.5e-47 191.0 139 71.9
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 8.5e-47 191.0 158 67.7
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 1.4e-46 190.3 207 60.4
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.4e-46 190.3 207 60.4
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.4e-46 190.3 158 67.7
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 1.4e-46 190.3 107 91.6
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 1.9e-46 189.9 182 62.6
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 1.9e-46 189.9 147 70.1
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 3.2e-46 189.1 202 58.9
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 4.2e-46 188.7 114 84.2
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 4.2e-46 188.7 145 71.7
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 4.2e-46 188.7 144 72.9
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 5.5e-46 188.3 116 83.6
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 5.5e-46 188.3 123 82.1
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 5.5e-46 188.3 107 89.7
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 5.5e-46 188.3 146 67.8
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 7.2e-46 188.0 107 88.8
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 9.4e-46 187.6 143 68.5
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 9.4e-46 187.6 131 76.3
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 2.1e-45 186.4 119 84.0
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 2.7e-45 186.0 119 80.7
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 3.6e-45 185.7 160 65.0
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 3.6e-45 185.7 107 89.7
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 4.6e-45 185.3 107 87.9
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 7.9e-45 184.5 162 61.7
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 1.0e-44 184.1 114 81.6
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 1.4e-44 183.7 163 62.0
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 1.4e-44 183.7 111 83.8
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 1.8e-44 183.3 211 53.6
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 1.8e-44 183.3 111 84.7
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 2.3e-44 183.0 140 74.3
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 3.9e-44 182.2 131 73.3
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 6.7e-44 181.4 194 57.2
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 8.8e-44 181.0 116 79.3
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 8.8e-44 181.0 117 82.9
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 1.1e-43 180.6 133 72.2
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 1.1e-43 180.6 130 76.2
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 3.3e-43 179.1 133 69.2
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 4.3e-43 178.7 147 64.6
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 4.3e-43 178.7 138 74.6
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 7.4e-43 177.9 142 68.3
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 7.4e-43 177.9 152 63.2
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 1.3e-42 177.2 119 77.3
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 2.2e-42 176.4 108 80.6
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 2.2e-42 176.4 108 80.6
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 2.2e-42 176.4 108 80.6
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 2.2e-42 176.4 108 80.6
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 2.2e-42 176.4 144 71.5
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 3.7e-42 175.6 107 81.3
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 3.7e-42 175.6 107 81.3
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 3.7e-42 175.6 136 69.9
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 6.3e-42 174.9 107 80.4
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 6.3e-42 174.9 128 71.9
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 8.2e-42 174.5 129 69.8
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 1.8e-41 173.3 110 81.8
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 3.4e-40 169.1 122 71.3
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 1.0e-39 167.5 122 69.7
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 3.8e-39 165.6 113 75.2
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.2e-38 162.5 191 55.0
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 6.7e-36 154.8 123 65.9
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 6.7e-36 154.8 110 70.0
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 8.8e-36 154.5 117 67.5
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 8.8e-36 154.5 130 61.5
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 2.0e-35 153.3 114 68.4
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 5.9e-32 141.7 199 50.3
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 1.3e-31 140.6 89 84.3
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 5.0e-31 138.7 118 57.6
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 5.2e-28 128.6 86 77.9
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 5.2e-28 128.6 86 77.9
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 9.1e-25 117.9 127 50.4
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 8.8e-20 101.3 80 71.2
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 9.8e-19 97.8 138 41.3
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 9.8e-19 97.8 155 46.5
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 5.9e-16 88.6 104 46.2


User provided reference genes

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