Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g150171.1 Solanum lycopersicum HOM05D000500 ORTHO05D000367 6.0e-45 183.7 88 100.0
PGSC0003DMG400011683 Solanum tuberosum HOM05D000500 ORTHO05D000367 1.8e-36 155.6 104 77.9
Sopen04g033090 Solanum pennellii HOM05D000500 ORTHO05D000367 1.5e-32 142.5 104 73.1
Sopen04g032980 Solanum pennellii HOM05D000500 ORTHO05D000367 3.0e-28 128.3 109 67.0
PGSC0003DMG400007995 Solanum tuberosum HOM05D000500 ORTHO05D000367 3.9e-28 127.9 109 65.1
Solyc04g079370.4 Solanum lycopersicum HOM05D000500 ORTHO05D000367 5.6e-27 124.0 109 65.1
PGSC0003DMG400007996 Solanum tuberosum HOM05D000500 ORTHO05D000367 7.4e-27 123.6 109 64.2
Nitab4.5_0008515g0020 Nicotiana tabacum HOM05D000500 ORTHO05D000367 4.2e-22 107.8 102 58.8
Peaxi162Scf01092g00125 Petunia axillaris HOM05D000500 ORTHO05D000367 1.2e-21 106.3 103 55.3
Nitab4.5_0008039g0020 Nicotiana tabacum HOM05D000500 ORTHO05D000367 2.1e-21 105.5 61 75.4
CAN.G371.53 Capsicum annuum HOM05D000500 ORTHO05D000367 7.9e-21 103.6 100 60.0
Nitab4.5_0000068g0390 Nicotiana tabacum HOM05D000500 ORTHO05D000367 5.1e-20 100.9 105 52.4
CAN.G371.56 Capsicum annuum HOM05D000500 ORTHO05D000367 5.7e-19 97.4 65 70.8
Peaxi162Scf00039g00163 Petunia axillaris HOM05D000500 ORTHO05D000367 2.8e-18 95.1 99 52.5
Peaxi162Scf00333g00033 Petunia axillaris HOM05D000500 ORTHO05D000367 5.3e-17 90.9 97 48.5
CAN.G138.17 Capsicum annuum HOM05D000185 ORTHO05D000105 7.7e-16 87.0 58 70.7
CAN.G14.35 Capsicum annuum HOM05D000500 ORTHO05D000367 1.0e-15 86.7 63 65.1
Nitab4.5_0008935g0040 Nicotiana tabacum HOM05D000500 ORTHO05D000367 1.3e-15 86.3 58 70.7
Nitab4.5_0000523g0080 Nicotiana tabacum HOM05D000500 ORTHO05D000367 1.6e-13 79.3 95 45.3
Nitab4.5_0000523g0090 Nicotiana tabacum HOM05D000500 ORTHO05D000367 1.8e-12 75.9 57 63.2
Peaxi162Scf00925g00323 Petunia axillaris HOM05D000500 ORTHO05D000367 3.3e-11 71.6 94 44.7
Peaxi162Scf00380g00619 Petunia axillaris HOM05D000500 ORTHO05D000367 8.2e-10 67.0 93 39.8
Actinidia03539 Actinidia chinensis HOM05D000500 ORTHO05D000367 1.4e-09 66.2 100 43.0
Peaxi162Scf00333g00411 Petunia axillaris HOM05D000500 ORTHO05D000367 9.1e-09 63.5 51 58.8
Dinv13809 Davidia involucrata HOM05D000500 ORTHO05D000367 3.4e-08 61.6 66 54.5
CAN.G59.17 Capsicum annuum HOM05D000500 ORTHO05D000367 4.5e-08 61.2 48 60.4
ECA246G4114 Erigeron canadensis HOM05D000500 ORTHO05D000367 7.7e-08 60.5 105 39.0
Dinv01236 Davidia involucrata HOM05D000500 ORTHO05D000367 1.3e-07 59.7 52 59.6
Aa31LG3G4450 Aethionema arabicum HOM05D000500 ORTHO05D000367 2.2e-07 58.9 96 39.6
Gohir.1Z049496 Gossypium hirsutum HOM05D000500 ORTHO05D000367 3.8e-07 58.2 96 40.6
Gohir.D06G180200 Gossypium hirsutum HOM05D000500 ORTHO05D000367 3.8e-07 58.2 96 40.6
Gorai.010G211500 Gossypium raimondii HOM05D000500 ORTHO05D000367 3.8e-07 58.2 96 40.6
Rhsim09G0016900 Rhododendron simsii HOM05D000500 ORTHO05D000367 6.5e-07 57.4 97 39.2
Gohir.A11G058601 Gossypium hirsutum HOM05D000500 ORTHO05D000367 8.5e-07 57.0 96 39.6
Aa31LG3G4470 Aethionema arabicum HOM05D000500 ORTHO05D000367 1.4e-06 56.2 92 41.3
ECA232G2173 Erigeron canadensis HOM05D000500 ORTHO05D020575 2.5e-06 55.5 51 52.9
Lj1g0025629 Lotus japonicus HOM05D000500 ORTHO05D000367 3.2e-06 55.1 65 49.2
Peaxi162Scf00162g00034 Petunia axillaris HOM05D000500 ORTHO05D000367 3.2e-06 55.1 76 40.8
Rhsim09G0016800 Rhododendron simsii HOM05D000500 ORTHO05D000367 3.2e-06 55.1 95 40.0
Rhsim09G0017400 Rhododendron simsii HOM05D000500 ORTHO05D000367 3.2e-06 55.1 95 43.2
Lj1g0021409 Lotus japonicus HOM05D000500 ORTHO05D000367 4.2e-06 54.7 50 56.0
Solyc04g079490.1 Solanum lycopersicum HOM05D000500 ORTHO05D000367 4.2e-06 54.7 58 50.0
Sopen04g033080 Solanum pennellii HOM05D000500 ORTHO05D000367 4.2e-06 54.7 58 50.0
Rhsim09G0017000 Rhododendron simsii HOM05D000500 ORTHO05D000367 5.5e-06 54.3 94 40.4
Peaxi162Scf01092g00007 Petunia axillaris HOM05D000500 ORTHO05D000367 7.2e-06 53.9 58 51.7
Rhsim09G0016700 Rhododendron simsii HOM05D000500 ORTHO05D000367 7.2e-06 53.9 95 36.8
Rhsim09G0017500 Rhododendron simsii HOM05D000500 ORTHO05D000367 7.2e-06 53.9 94 41.5
ECA232G2037 Erigeron canadensis HOM05D000500 ORTHO05D000367 9.4e-06 53.5 67 46.3
Lj1g0005978 Lotus japonicus HOM05D000500 ORTHO05D000367 9.4e-06 53.5 51 56.9
Nitab4.5_0005577g0040 Nicotiana tabacum HOM05D000500 ORTHO05D000367 9.4e-06 53.5 80 42.5


User provided reference genes

Program Settings