Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g150155.1 Solanum lycopersicum HOM05D002420 ORTHO05D002422 3.2e-101 371.7 183 100.0
PGSC0003DMG400032474 Solanum tuberosum HOM05D002420 ORTHO05D002422 4.1e-56 221.9 130 82.3
Sopen01g040930 Solanum pennellii HOM05D002420 ORTHO05D002422 1.2e-55 220.3 128 82.0
PGSC0003DMG401019442 Solanum tuberosum HOM05D002420 ORTHO05D002422 1.2e-55 220.3 130 81.5
PGSC0003DMG402019442 Solanum tuberosum HOM05D002420 ORTHO05D002422 3.5e-55 218.8 130 81.5
Sopen05g028290 Solanum pennellii HOM05D002420 ORTHO05D002422 8.6e-54 214.2 128 81.2
Sopen00g008500 Solanum pennellii HOM05D002420 ORTHO05D002422 3.6e-52 208.8 128 79.7
CAN.G134.123 Capsicum annuum HOM05D002420 ORTHO05D002422 2.1e-44 183.0 122 70.5
PGSC0003DMG400019443 Solanum tuberosum HOM05D002420 ORTHO05D002422 1.4e-43 180.3 122 69.7
Solyc04g056525.1 Solanum lycopersicum HOM05D002420 ORTHO05D002422 1.4e-40 170.2 97 85.6
Sopen04g025450 Solanum pennellii HOM05D002420 ORTHO05D002422 1.3e-38 163.7 86 90.7
Sopen01g041250 Solanum pennellii HOM05D002230 ORTHO05D002441 4.3e-37 158.7 95 80.0
Sopen05g028260 Solanum pennellii HOM05D002420 ORTHO05D002422 4.0e-35 152.1 113 67.3
Nitab4.5_0001827g0080 Nicotiana tabacum HOM05D002420 ORTHO05D002422 5.5e-24 115.2 127 52.8
Nitab4.5_0000434g0050 Nicotiana tabacum HOM05D002420 ORTHO05D002422 2.7e-23 112.8 127 52.0
Solyc02g062800.2 Solanum lycopersicum HOM05D002420 ORTHO05D002422 1.8e-22 110.2 138 44.9
PGSC0003DMG400015473 Solanum tuberosum HOM05D002420 ORTHO05D002422 5.1e-22 108.6 122 48.4
Sopen02g013840 Solanum pennellii HOM05D002420 ORTHO05D002422 6.7e-22 108.2 122 47.5
Sopen02g030120 Solanum pennellii HOM05D002420 ORTHO05D002422 8.7e-22 107.8 131 48.1
PGSC0003DMG400014891 Solanum tuberosum HOM05D002420 ORTHO05D002422 3.3e-21 105.9 148 44.6
Peaxi162Scf00515g00043 Petunia axillaris HOM05D002420 ORTHO05D002422 3.7e-20 102.4 121 47.9
Nitab4.5_0000136g0430 Nicotiana tabacum HOM05D002420 ORTHO05D002422 2.0e-18 96.7 130 45.4
Nitab4.5_0003233g0040 Nicotiana tabacum HOM05D002420 ORTHO05D002422 1.7e-17 93.6 129 45.0
CAN.G53.20 Capsicum annuum HOM05D002420 ORTHO05D002422 4.9e-17 92.0 122 43.4
Peaxi162Scf00008g00373 Petunia axillaris HOM05D002420 ORTHO05D002422 6.5e-17 91.7 139 41.7
CAN.G358.108 Capsicum annuum HOM05D002420 ORTHO05D002422 2.8e-12 76.3 65 60.0
Oeu024879.1 Olea europaea HOM05D002420 ORTHO05D002422 6.3e-12 75.1 129 36.4
CSS0039427 Camellia sinensis var. sinensis HOM05D002420 ORTHO05D002422 1.3e-09 67.4 130 32.3
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 3.2e-08 62.8 126 37.3
MD02G1150100 Malus domestica HOM05D002420 ORTHO05D002422 2.3e-06 56.6 121 32.2
Solyc01g097630.3 Solanum lycopersicum HOM05D002420 ORTHO05D002422 2.3e-06 56.6 36 75.0


User provided reference genes

Program Settings