Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g150152.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 4.3e-59 231.1 114 100.0
Solyc04g150151.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 4.1e-38 161.4 88 93.2
Solyc04g150154.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 3.0e-36 155.2 88 89.8
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-32 142.5 98 75.5
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 2.1e-29 132.5 96 66.7
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 2.1e-29 132.5 97 69.1
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.6e-28 127.1 101 59.4
Nitab4.5_0000581g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-26 123.2 92 64.1
Nitab4.5_0006718g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-26 123.2 101 57.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 1.1e-25 120.2 97 62.9
Nitab4.5_0001523g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-25 120.2 91 61.5
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.0e-25 118.2 88 63.6
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-25 117.9 92 68.5
Nitab4.5_0007229g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.9e-25 117.1 101 56.4
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-24 115.9 102 56.9
Nitab4.5_0000285g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-24 114.4 88 58.0
Nitab4.5_0004210g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.9e-24 113.6 91 61.5
Nitab4.5_0001556g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-23 112.8 101 55.4
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 1.7e-23 112.8 92 59.8
Nitab4.5_0000220g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.2e-23 112.5 92 56.5
Nitab4.5_0000580g0310 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-23 112.1 88 59.1
Nitab4.5_0001645g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.9e-23 111.3 92 60.9
Nitab4.5_0000151g0380 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-22 109.4 97 57.7
Nitab4.5_0001346g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-22 109.4 92 56.5
Nitab4.5_0008492g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-22 108.2 92 56.5
Sopen04g022360 Solanum pennellii HOM05D001309 ORTHO05D000385 5.4e-22 107.8 54 96.3
Nitab4.5_0001388g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.1e-22 107.5 97 54.6
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-21 106.7 87 60.9
Nitab4.5_0000039g0160 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.5e-21 105.1 92 52.2
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.6e-21 104.8 97 53.6
Nitab4.5_0000423g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.8e-21 104.0 91 54.9
Nitab4.5_0002530g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.8e-21 104.0 87 62.1
Nitab4.5_0001199g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-20 103.2 101 51.5
Nitab4.5_0008724g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-20 103.2 80 65.0
Nitab4.5_0004353g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-20 102.1 98 56.1
Nitab4.5_0012715g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-19 99.8 88 55.7
Nitab4.5_0000049g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-19 99.4 97 51.5
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-19 99.4 92 54.3
Nitab4.5_0008316g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.5e-19 99.0 92 51.1
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-19 97.4 103 49.5
Nitab4.5_0001282g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.3e-19 97.4 88 47.7
Nitab4.5_0000931g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.6e-19 97.1 84 56.0
Nitab4.5_0006065g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.8e-18 94.7 58 77.6
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-17 92.8 92 52.2
Nitab4.5_0006915g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.0e-17 91.7 97 49.5
Nitab4.5_0007152g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.3e-17 91.3 74 58.1
Sopen04g022380 Solanum pennellii HOM05D007487 ORTHO05D008561 5.3e-17 91.3 72 68.1
Nitab4.5_0000522g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.2e-16 90.1 57 75.4
Nitab4.5_0003433g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-16 87.8 75 54.7
Nitab4.5_0003622g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.6e-16 87.4 65 63.1
Nitab4.5_0000644g0170 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-15 85.1 65 63.1
Nitab4.5_0001369g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-15 85.1 65 61.5
Nitab4.5_0000318g0200 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.9e-15 84.7 70 60.0
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 2.4e-14 82.4 100 46.0
Nitab4.5_0001490g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.3e-14 80.5 101 41.6
Nitab4.5_0001313g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-13 79.7 101 40.6
Nitab4.5_0002232g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.9e-13 77.4 58 67.2
Nitab4.5_0000415g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-12 76.6 62 56.5
Nitab4.5_0003202g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-12 76.6 66 59.1
PGSC0003DMG400039811 Solanum tuberosum HOM05D001309 ORTHO05D000385 1.3e-12 76.6 53 66.0
Nitab4.5_0002925g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.8e-12 76.3 55 61.8
Nitab4.5_0000740g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-12 75.5 52 67.3
Nitab4.5_0016483g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.0e-12 75.5 62 59.7
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.9e-12 75.1 76 52.6
Nitab4.5_0007969g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.9e-12 75.1 53 69.8
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.1e-12 74.7 62 56.5
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.1e-11 73.6 98 43.9
Nitab4.5_0000007g0330 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-11 73.2 56 57.1
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 7.4e-11 70.9 86 44.2
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-10 70.1 91 46.2
Nitab4.5_0003082g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-10 69.7 39 76.9
Nitab4.5_0002419g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-10 68.6 90 43.3
Nitab4.5_0010441g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.6e-10 68.6 62 54.8
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 3.6e-10 68.6 82 43.9
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 4.8e-10 68.2 86 43.0
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 4.8e-10 68.2 95 38.9
Nitab4.5_0000024g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.1e-10 67.4 65 50.8
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.1e-10 67.4 56 57.1
Sopen04g025420 Solanum pennellii HOM05D001309 ORTHO05D000385 8.1e-10 67.4 37 86.5
Nitab4.5_0000774g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-09 67.0 57 57.9
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.1e-09 67.0 84 42.9
Nitab4.5_0000524g0120 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-09 66.6 101 38.6
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.8e-09 66.2 86 44.2
PGSC0003DMG400042577 Solanum tuberosum HOM05D001309 ORTHO05D000385 3.1e-09 65.5 90 42.2
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 6.9e-09 64.3 84 41.7
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.0e-09 63.9 89 39.3
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.2e-08 63.5 90 40.0
Nitab4.5_0001903g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.5e-08 63.2 68 52.9
Sopen04g005960 Solanum pennellii HOM05D001309 ORTHO05D000385 1.5e-08 63.2 39 79.5
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.0e-08 62.8 86 38.4
Nitab4.5_0002263g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.0e-08 62.8 62 51.6
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.8e-08 61.2 86 39.5
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.8e-08 61.2 91 41.8
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.8e-08 61.2 106 37.7
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.3e-07 60.1 86 39.5
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.3e-07 60.1 85 44.7
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.7e-07 59.7 90 40.0
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 4.9e-07 58.2 79 38.0
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.4e-07 57.8 84 41.7
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.4e-07 57.8 84 41.7
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.4e-07 57.8 84 41.7
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.4e-07 57.8 84 41.7
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.4e-07 57.8 72 40.3
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.4e-07 57.4 84 41.7
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.4e-07 57.4 84 41.7
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.4e-07 57.4 84 41.7
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.4e-07 57.4 84 41.7
Nn6g34640 Nelumbo nucifera HOM05D010263 ORTHO05D022951 1.1e-06 57.0 86 36.0
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 1.4e-06 56.6 91 37.4
Nitab4.5_0001086g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-06 56.6 34 73.5
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.9e-06 56.2 81 38.3
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-06 56.2 86 37.2
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.2e-06 55.5 86 38.4
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.2e-06 55.5 92 40.2
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.2e-06 55.5 92 40.2
COL.COLO4_33862 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.2e-06 55.5 92 40.2
Nitab4.5_0000789g0060 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-06 55.5 32 81.2
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.2e-06 55.1 86 34.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.5e-06 54.7 87 36.8
MBI15_g14066_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.1e-06 54.3 86 34.9
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 9.3e-06 53.9 86 37.2
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 9.3e-06 53.9 92 39.1
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.3e-06 53.9 89 36.0
MBI17_g21607_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.3e-06 53.9 86 37.2
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.3e-06 53.9 47 46.8
Nitab4.5_0003970g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.3e-06 53.9 41 63.4
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.3e-06 53.9 89 37.1
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 9.3e-06 53.9 86 37.2
Zm00001eb380870 Zea mays HOM05D008576 ORTHO05D000385 9.3e-06 53.9 86 37.2


User provided reference genes

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