Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 6.3e-42 173.7 89 100.0
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 1.8e-36 155.6 89 91.0
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 2.5e-30 135.2 89 79.8
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 7.2e-30 133.7 89 79.8
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 2.1e-29 132.1 89 78.7
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 3.6e-29 131.3 86 74.4
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 4.7e-29 131.0 85 77.6
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 1.8e-28 129.0 87 72.4
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 1.8e-28 129.0 89 76.4
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 1.8e-28 129.0 89 77.5
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 2.3e-28 128.6 89 76.4
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 3.0e-28 128.3 89 77.5
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 3.0e-28 128.3 89 77.5
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 3.0e-28 128.3 90 77.8
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 5.2e-28 127.5 85 74.1
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 5.2e-28 127.5 89 74.2
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 1.5e-27 125.9 85 72.9
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 2.0e-27 125.6 85 71.8
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 2.6e-27 125.2 85 74.1
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 2.6e-27 125.2 89 75.3
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 4.4e-27 124.4 89 73.0
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 5.7e-27 124.0 89 74.2
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 9.7e-27 123.2 84 73.8
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 1.3e-26 122.9 86 74.4
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 1.3e-26 122.9 85 74.1
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 1.7e-26 122.5 90 71.1
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.8e-26 121.7 89 71.9
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.8e-26 121.7 89 71.9
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 1.1e-25 119.8 82 70.7
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 1.1e-25 119.8 87 70.1
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 1.1e-25 119.8 85 72.9
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 1.8e-25 119.0 82 69.5
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 2.4e-25 118.6 102 66.7
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 9.1e-25 116.7 82 73.2
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 9.1e-25 116.7 86 68.6
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 3.5e-24 114.8 88 69.3
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 3.5e-24 114.8 82 70.7
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 7.7e-24 113.6 85 69.4
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 1.0e-23 113.2 88 60.2
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 1.0e-23 113.2 83 68.7
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 1.3e-23 112.8 88 60.2
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 1.3e-23 112.8 88 58.0
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 1.3e-23 112.8 88 59.1
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 5.0e-23 110.9 88 60.2
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 5.0e-23 110.9 83 72.3
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 6.5e-23 110.5 88 56.8
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 8.5e-23 110.2 88 56.8
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 8.5e-23 110.2 79 69.6
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 1.1e-22 109.8 88 60.2
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 1.9e-22 109.0 84 60.7
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 1.9e-22 109.0 84 60.7
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 1.9e-22 109.0 72 77.8
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 3.2e-22 108.2 84 59.5
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 4.2e-22 107.8 84 59.5
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 7.2e-22 107.1 84 59.5
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 7.2e-22 107.1 82 69.5
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 9.4e-22 106.7 78 69.2
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 9.4e-22 106.7 79 65.8
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 1.6e-21 105.9 79 69.6
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.7e-21 105.1 82 67.1
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 8.0e-21 103.6 82 67.1
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 8.0e-21 103.6 79 74.7
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 5.2e-20 100.9 132 45.5
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 5.2e-20 100.9 104 61.5
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 8.8e-20 100.1 78 62.8
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 2.6e-19 98.6 87 57.5
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 3.4e-19 98.2 87 57.5
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 7.5e-19 97.1 116 50.0
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 2.4e-17 92.0 83 47.0
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 6.6e-15 84.0 89 47.2
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 1.8e-12 75.9 100 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 3.4e-11 71.6 79 48.1
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 7.5e-11 70.5 49 61.2
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 1.7e-10 69.3 50 70.0
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 1.7e-10 69.3 49 71.4
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 4.9e-10 67.8 42 78.6
Mapoly0013s0068 Marchantia polymorpha HOM05D008013 ORTHO05D010149 6.3e-10 67.4 82 42.7
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 5.4e-09 64.3 50 64.0
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 5.9e-08 60.8 63 47.6


User provided reference genes

Program Settings