Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 1.6e-155 552.7 285 100.0
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 1.7e-152 542.7 285 98.6
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 2.2e-136 489.2 293 89.8
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 2.6e-113 412.5 291 79.0
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 2.5e-76 289.7 302 58.6
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 4.5e-57 225.7 287 53.7
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 6.0e-54 215.3 266 52.3
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 3.8e-48 196.1 296 45.9
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 5.5e-47 192.2 301 46.8
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 7.1e-47 191.8 255 49.8
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 2.1e-46 190.3 286 47.9
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 2.1e-46 190.3 233 56.2
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 7.9e-46 188.3 296 47.0
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 3.0e-45 186.4 302 43.4
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 3.9e-45 186.0 260 48.5
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 6.7e-45 185.3 289 44.3
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 2.5e-44 183.3 297 46.5
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 2.5e-44 183.3 276 46.0
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 1.3e-43 181.0 311 43.7
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 2.8e-43 179.9 306 45.1
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 3.7e-43 179.5 253 47.0
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 8.2e-43 178.3 291 46.4
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 5.3e-42 175.6 181 58.6
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 9.0e-42 174.9 303 43.6
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 2.0e-41 173.7 294 43.5
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.0e-41 173.7 290 45.5
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.4e-41 172.9 290 45.2
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.5e-41 172.6 287 45.3
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 4.5e-41 172.6 283 44.2
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 1.3e-40 171.0 301 44.9
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 1.7e-40 170.6 289 44.6
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 2.9e-40 169.9 244 47.5
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 6.5e-40 168.7 164 61.0
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.9e-39 167.2 297 44.1
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 3.2e-39 166.4 281 42.3
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 5.5e-39 165.6 149 60.4
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 7.2e-39 165.2 296 42.2
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 2.7e-38 163.3 256 44.5
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 6.1e-38 162.2 307 40.7
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 1.8e-37 160.6 211 47.9
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 3.9e-37 159.5 240 46.7
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 3.9e-37 159.5 216 49.1
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.1e-37 159.1 239 47.3
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.7e-37 158.7 239 47.3
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 6.7e-37 158.7 263 44.1
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 8.8e-37 158.3 249 46.2
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 1.5e-36 157.5 246 42.7
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 3.3e-36 156.4 288 42.7
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 3.3e-36 156.4 240 44.6
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 3.3e-36 156.4 249 45.4
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 4.3e-36 156.0 244 43.9
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 5.7e-36 155.6 255 44.7
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 5.7e-36 155.6 296 41.2
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 7.4e-36 155.2 272 43.4
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 9.7e-36 154.8 242 43.0
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 2.2e-35 153.7 213 46.5
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 1.1e-34 151.4 241 45.6
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 1.1e-34 151.4 278 39.9
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 1.1e-34 151.4 286 37.4
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.8e-34 150.6 250 45.2
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 1.8e-34 150.6 172 53.5
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 2.4e-34 150.2 260 42.3
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 2.4e-34 150.2 325 40.9
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.3e-34 149.1 294 43.2
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 5.3e-34 149.1 240 42.1
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 9.1e-34 148.3 240 42.1
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 9.1e-34 148.3 240 42.1
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 1.7e-32 144.1 254 44.1
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 3.8e-32 142.9 279 42.7
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 8.5e-32 141.7 298 38.3
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 8.5e-32 141.7 161 57.1
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 1.1e-31 141.4 280 41.1
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 1.4e-31 141.0 165 53.9
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 1.4e-31 141.0 272 39.7
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 7.2e-31 138.7 268 42.5
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 7.2e-31 138.7 263 41.4
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 7.2e-31 138.7 260 43.5
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 7.2e-31 138.7 263 41.4
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 7.2e-31 138.7 263 41.4
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 7.2e-31 138.7 260 43.5
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 2.1e-30 137.1 282 40.1
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 2.1e-30 137.1 238 43.3
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 2.1e-30 137.1 254 41.3
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 3.6e-30 136.3 317 39.1
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 1.0e-29 134.8 180 49.4
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 1.8e-29 134.0 230 45.7
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 1.8e-29 134.0 303 39.6
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 6.7e-29 132.1 309 39.8
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.1e-28 131.3 280 38.2
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 3.3e-28 129.8 282 39.4
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 4.4e-28 129.4 336 34.8
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 7.4e-28 128.6 341 33.7
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 9.7e-28 128.3 287 38.7
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 2.8e-27 126.7 296 37.8
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.2e-25 121.3 132 55.3
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.0e-25 120.6 184 47.8
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 1.3e-24 117.9 238 36.1
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 1.7e-24 117.5 223 41.7
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 8.5e-24 115.2 242 39.7
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 8.5e-24 115.2 222 40.5
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 5.5e-23 112.5 177 46.3
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 9.4e-23 111.7 277 35.4
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 1.2e-22 111.3 271 36.2
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 1.6e-22 110.9 162 46.3
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 3.6e-22 109.8 206 41.3
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.6e-22 109.8 141 51.1
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.0e-22 108.6 132 50.0
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 1.8e-21 107.5 266 36.1
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 2.3e-21 107.1 265 33.2
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 2.6e-20 103.6 206 39.3
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 5.7e-20 102.4 321 35.8
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 9.7e-20 101.7 118 51.7
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 1.1e-18 98.2 168 39.3
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.5e-16 89.0 66 68.2
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 1.9e-15 87.4 65 72.3
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 1.2e-14 84.7 221 36.2
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.4e-13 81.3 180 39.4
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.8e-13 80.9 70 62.9
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 8.3e-11 72.0 61 60.7
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 8.5e-08 62.0 50 64.0
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 6.1e-06 55.8 155 33.5


User provided reference genes

Program Settings