Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g081640.3 Solanum lycopersicum HOM05D000222 ORTHO05D392985 3.0e-87 325.1 159 100.0
Lj4C22T9 Lonicera japonica HOM05D000222 ORTHO05D000329 3.2e-12 75.9 97 45.4
Lalb_Chr03g0033421 Lupinus albus HOM05D000222 ORTHO05D000329 4.2e-12 75.5 97 42.3
Lsat_1_v5_gn_8_30781 Lactuca sativa HOM05D000222 ORTHO05D000329 5.4e-12 75.1 97 43.3
CAN.G311.42 Capsicum annuum HOM05D000222 ORTHO05D000329 1.2e-11 73.9 97 43.3
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 1.2e-11 73.9 97 45.4
Medtr1g025430 Medicago truncatula HOM05D000222 ORTHO05D000329 1.2e-11 73.9 97 42.3
Zm00001eb272290 Zea mays HOM05D000222 ORTHO05D000329 1.2e-11 73.9 97 43.3
Ca_13433_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 1.6e-11 73.6 97 41.2
Ca_28044_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 1.6e-11 73.6 97 41.2
TPR.G26394 Trifolium pratense HOM05D000222 ORTHO05D000329 1.6e-11 73.6 97 42.3
Zm00001eb228120 Zea mays HOM05D000222 ORTHO05D000329 1.6e-11 73.6 97 42.3
PGR083G1489 Punica granatum HOM05D000222 ORTHO05D000329 2.1e-11 73.2 97 44.3
Lj4C798T7 Lonicera japonica HOM05D000222 ORTHO05D000329 2.7e-11 72.8 97 44.3
Solyc04g081570.3 Solanum lycopersicum HOM05D000222 ORTHO05D000329 2.7e-11 72.8 97 44.3
Sopen04g035180 Solanum pennellii HOM05D000222 ORTHO05D000329 2.7e-11 72.8 97 44.3
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 3.5e-11 72.4 97 45.4
MELO3C011021.2 Cucumis melo HOM05D000222 ORTHO05D000329 3.5e-11 72.4 97 43.3
CsaV3_2G029630 Cucumis sativus L. HOM05D000222 ORTHO05D000329 3.5e-11 72.4 97 43.3
Lalb_Chr08g0246171 Lupinus albus HOM05D000222 ORTHO05D000329 3.5e-11 72.4 97 42.3
Aqoxy1G02465 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 4.6e-11 72.0 97 43.3
EL10Ac1g02175 Beta vulgaris HOM05D000222 ORTHO05D000329 4.6e-11 72.0 97 44.3
CSS0018705 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 4.6e-11 72.0 97 45.4
Cc10_g01540 Coffea canephora HOM05D000222 ORTHO05D000329 4.6e-11 72.0 97 44.3
DCAR_023014 Daucus carota HOM05D000222 ORTHO05D000329 4.6e-11 72.0 97 45.4
Psat0s1664g0080 Pisum sativum HOM05D000222 ORTHO05D000329 4.6e-11 72.0 97 41.2
Sed0002325 Sechium edule HOM05D000222 ORTHO05D000329 4.6e-11 72.0 97 44.3
TAR381G1457 Trochodendron aralioides HOM05D000222 ORTHO05D000329 4.6e-11 72.0 97 44.3
DCAR_013875 Daucus carota HOM05D000222 ORTHO05D000329 6.0e-11 71.6 97 42.3
Os06g0716700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 6.0e-11 71.6 97 41.2
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 44.3
AUR62040542 Chenopodium quinoa HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 44.3
AUR62041482 Chenopodium quinoa HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 44.3
Glyma.14G219700 Glycine max HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 41.2
Glyma.17G258700 Glycine max HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 41.2
HanXRQChr13g0387091 Helianthus annuus HOM05D000222 ORTHO05D000329 7.9e-11 71.2 122 36.9
RhsimUnG0065400 Rhododendron simsii HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 44.3
Hund05159 Selenicereus undatus HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 45.4
Sc02g0008650 Simmondsia chinensis HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 44.3
PGSC0003DMG400009940 Solanum tuberosum HOM05D000222 ORTHO05D000329 7.9e-11 71.2 97 43.3
AT4G24190 Arabidopsis thaliana HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 43.3
BcaC09g50898 Brassica carinata HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 44.3
CDE05G2968 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 43.3
Gohir.A06G002800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 44.3
Gohir.A06G002900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 44.3
Gohir.D06G005800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 44.3
Gohir.D06G005900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 44.3
Gorai.010G003000 Gossypium raimondii HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 44.3
Peaxi162Scf00553g00086 Petunia axillaris HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 43.3
SalBow8G4062 Salvia bowleyana HOM05D000222 ORTHO05D000329 1.0e-10 70.9 97 44.3
AL7G29090 Arabidopsis lyrata HOM05D000222 ORTHO05D000329 1.3e-10 70.5 97 44.3
CDE05G1631 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 1.3e-10 70.5 97 42.3
Oeu046282.1 Olea europaea HOM05D000222 ORTHO05D000329 1.3e-10 70.5 97 44.3
Psat6g002360 Pisum sativum HOM05D000222 ORTHO05D000329 1.3e-10 70.5 97 40.2
VMungo0647G1547 Vigna mungo HOM05D000222 ORTHO05D000329 1.3e-10 70.5 97 41.2
Actinidia15430 Actinidia chinensis HOM05D000222 ORTHO05D000329 1.7e-10 70.1 98 41.8
Carub.0007s1690 Capsella rubella HOM05D000222 ORTHO05D000329 1.7e-10 70.1 97 44.3
CARHR231600 Cardamine hirsuta HOM05D000222 ORTHO05D000329 1.7e-10 70.1 97 44.3
Dinv39529 Davidia involucrata HOM05D000222 ORTHO05D000329 1.7e-10 70.1 97 43.3
Nn6g32037 Nelumbo nucifera HOM05D000222 ORTHO05D000329 1.7e-10 70.1 97 43.3
PSO675G6717 Papaver somniferum HOM05D000222 ORTHO05D000329 1.7e-10 70.1 97 42.3
Prupe.1G363900 Prunus persica HOM05D000222 ORTHO05D000329 1.7e-10 70.1 97 42.3
RcHm_v2.0_Chr6g0303071 Rosa chinensis HOM05D000222 ORTHO05D000329 1.7e-10 70.1 97 42.3
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.7e-10 70.1 97 43.3
Aqoxy152s001 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 2.3e-10 69.7 97 44.3
Aqoxy6G02232 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 2.3e-10 69.7 97 44.3
Duzib116G0368 Durio zibethinus HOM05D000222 ORTHO05D000329 2.3e-10 69.7 97 44.3
Migut.N03167 Erythranthe guttata HOM05D000222 ORTHO05D000329 2.3e-10 69.7 97 43.3
Phvul.001G005200 Phaseolus vulgaris HOM05D000222 ORTHO05D000329 2.3e-10 69.7 97 40.2
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 2.3e-10 69.7 97 43.3
Sabra05G0186600 Salix brachista HOM05D000222 ORTHO05D000329 2.3e-10 69.7 97 43.3
ATR0810G217 Amborella trichopoda HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 40.2
BcaNung01125 Brassica carinata HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 44.3
A01p15520 Brassica napus HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 44.3
C01p19440 Brassica napus HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 44.3
BolC1t01873H Brassica oleracea HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 44.3
BraA01t01491Z Brassica rapa HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 44.3
ECA233G5047 Erigeron canadensis HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 42.3
Thhalv10024414m.g Eutrema salsugineum HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 44.3
Gohir.A01G110500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 41.2
Gohir.D01G097100 Gossypium hirsutum HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 41.2
Gorai.002G122800 Gossypium raimondii HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 41.2
Lalb_Chr19g0131441 Lupinus albus HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 40.2
Nitab4.5_0000337g0070 Nicotiana tabacum HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 42.3
Nitab4.5_0003251g0080 Nicotiana tabacum HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 42.3
Thecc.08G046300 Theobroma cacao HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 44.3
vmacro04362 Vaccinium macrocarpon HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 43.3
GSVIVG01009931001 Vitis vinifera HOM05D000222 ORTHO05D000329 3.0e-10 69.3 97 43.3
Aa31sc288G10 Aethionema arabicum HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 43.3
CANSAT78G1241 Cannabis sativa HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 42.3
Migut.C00851 Erythranthe guttata HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 43.3
Eucgr.H00972 Eucalyptus grandis HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 41.2
Sp7g22160 Schrenkiella parvula HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 43.3
Sed0003929 Sechium edule HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 42.3
Sc15g0004910 Simmondsia chinensis HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 42.3
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 43.3
HPP92_012933 Vanilla planifolia HOM05D000222 ORTHO05D000329 3.9e-10 68.9 97 39.2
C07p53420 Brassica napus HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 43.3
BolC7t45836H Brassica oleracea HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 43.3
FvH4_2g38300 Fragaria vesca HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 42.3
FAN15G0622 Fragaria x ananassa HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 42.3
FAN20G2674 Fragaria x ananassa HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 42.3
FAN27G0624 Fragaria x ananassa HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 42.3
PSO541G0316 Papaver somniferum HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 41.2
QL02p011881 Quercus lobata HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 42.3
TAR628G0053 Trochodendron aralioides HOM05D000222 ORTHO05D000329 5.1e-10 68.6 97 41.2
arahy.Tifrunner.gnm1.ann1.P8FSM4 Arachis hypogaea HOM05D000222 ORTHO05D000329 6.6e-10 68.2 97 39.2
arahy.Tifrunner.gnm1.ann1.T76A9L Arachis hypogaea HOM05D000222 ORTHO05D000329 6.6e-10 68.2 97 39.2
MSTRG.1183 Avicennia marina HOM05D000222 ORTHO05D000329 6.6e-10 68.2 97 41.2
BcaC07g38137 Brassica carinata HOM05D000222 ORTHO05D000329 6.6e-10 68.2 97 44.3
COL.COLO4_26130 Corchorus olitorius HOM05D000222 ORTHO05D000329 6.6e-10 68.2 97 43.3
Lalb_Chr11g0061831 Lupinus albus HOM05D000222 ORTHO05D000329 6.6e-10 68.2 97 39.2
TWI56G0657 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 6.6e-10 68.2 97 42.3
A03p55100 Brassica napus HOM05D000222 ORTHO05D000329 8.7e-10 67.8 97 43.3
BraA03t14570Z Brassica rapa HOM05D000222 ORTHO05D000329 8.7e-10 67.8 97 43.3
Hma1.2p1_0733F.1_g210310 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 8.7e-10 67.8 97 40.2
Hund01603 Selenicereus undatus HOM05D000222 ORTHO05D000329 8.7e-10 67.8 98 42.9
SEGI_06170 Sequoiadendron giganteum HOM05D000222 ORTHO05D000329 8.7e-10 67.8 97 41.2
MSTRG.25258 Avicennia marina HOM05D000222 ORTHO05D000329 1.1e-09 67.4 97 40.2
A08p21570 Brassica napus HOM05D000222 ORTHO05D000329 1.1e-09 67.4 97 44.3
BraA08t34104Z Brassica rapa HOM05D000222 ORTHO05D000329 1.1e-09 67.4 97 44.3
Dinv31859 Davidia involucrata HOM05D000222 ORTHO05D000329 1.1e-09 67.4 97 41.2
MD08G1011200 Malus domestica HOM05D000222 ORTHO05D000329 1.1e-09 67.4 97 40.2
Duzib093G0379 Durio zibethinus HOM05D000222 ORTHO05D000329 1.5e-09 67.0 97 43.3
Nitab4.5_0000337g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 1.5e-09 67.0 97 42.3
HanXRQChr12g0366871 Helianthus annuus HOM05D000222 ORTHO05D000329 1.9e-09 66.6 97 41.2
Lj5g0005976 Lotus japonicus HOM05D000222 ORTHO05D000329 1.9e-09 66.6 97 39.2
Manes.18G012500 Manihot esculenta HOM05D000222 ORTHO05D000329 1.9e-09 66.6 97 41.2
MBI05_g33509_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 2.5e-09 66.2 97 40.2
Manes.18G012200 Manihot esculenta HOM05D000222 ORTHO05D000329 2.5e-09 66.2 97 41.2
Nn5g30723 Nelumbo nucifera HOM05D000222 ORTHO05D000329 2.5e-09 66.2 97 41.2
BolC8t48563H Brassica oleracea HOM05D000222 ORTHO05D000329 5.6e-09 65.1 97 43.3
Mapoly0031s0145 Marchantia polymorpha HOM05D000222 ORTHO05D000329 4.8e-08 62.0 97 39.2
Pp3c14_3360 Physcomitrium patens HOM05D000222 ORTHO05D000329 4.8e-08 62.0 96 39.6
AagrBONN_evm.TU.Sc2ySwM_344.3459 Anthoceros agrestis HOM05D000222 ORTHO05D000329 3.1e-07 59.3 97 36.1
SHI08058 Sapria himalayana HOM05D000222 ORTHO05D000329 2.6e-06 56.2 97 34.0
MBI05_g33510_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 3.4e-06 55.8 137 30.7
Pp3c8_6510 Physcomitrium patens HOM05D000222 ORTHO05D000329 3.4e-06 55.8 97 32.0
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 5.8e-06 55.1 87 40.2


User provided reference genes

Program Settings