Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 2.3e-166 589.0 327 100.0
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 3.7e-140 501.9 289 98.3
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 3.8e-68 262.7 302 56.0
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 4.0e-62 242.7 277 55.6
CAN.G311.33 Capsicum annuum HOM05D021694 ORTHO05D008337 1.0e-60 238.0 160 77.5
PGSC0003DMG400009866 Solanum tuberosum HOM05D021694 ORTHO05D008337 2.9e-60 236.5 124 95.2
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 9.4e-35 151.8 288 40.6
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 1.3e-31 141.4 284 43.0
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 1.0e-28 131.7 305 37.0
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 8.8e-25 118.6 280 34.6
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 2.0e-24 117.5 306 32.4
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 2.0e-24 117.5 291 37.5
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 9.8e-24 115.2 333 32.7
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.3e-23 114.8 305 36.7
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.3e-23 114.8 334 35.3
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 2.2e-23 114.0 272 40.4
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 4.8e-23 112.8 293 33.1
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 4.1e-22 109.8 306 33.7
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.6e-21 107.8 312 31.4
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 3.5e-21 106.7 317 31.2
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 5.9e-21 105.9 295 29.8
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 1.0e-20 105.1 321 34.3
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 1.5e-19 101.3 156 43.6
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 1.6e-18 97.8 305 31.1
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 8.0e-18 95.5 303 29.7
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.0e-17 95.1 324 27.5
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 2.3e-17 94.0 281 33.8
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 2.6e-16 90.5 295 32.2
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 3.4e-16 90.1 162 40.1
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 4.4e-16 89.7 288 32.6
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 9.8e-16 88.6 163 42.9
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 9.8e-16 88.6 287 31.0
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.3e-15 88.2 286 28.7
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 4.9e-15 86.3 311 31.2
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 2.0e-13 80.9 312 30.1
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 2.7e-13 80.5 291 30.6
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 3.5e-13 80.1 303 31.7
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 5.9e-13 79.3 305 29.8
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 2.3e-12 77.4 314 28.7
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 1.5e-11 74.7 281 28.8
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 1.5e-11 74.7 284 29.9
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 9.5e-11 72.0 222 33.8
SGA_v2.0_scaffold35G14252 Striga asiatica HOM05D007760 ORTHO05D008337 9.5e-11 72.0 154 37.0
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 4.0e-09 66.6 229 26.2
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 6.8e-09 65.9 217 31.8
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 6.8e-09 65.9 261 27.2
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 8.9e-09 65.5 160 37.5
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 8.9e-09 65.5 172 34.3
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.2e-08 65.1 246 26.8
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 1.2e-08 65.1 261 28.0
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.5e-08 64.7 261 26.8
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.0e-08 64.3 273 27.8
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.0e-08 64.3 274 27.4
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 2.6e-08 63.9 281 27.8
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.4e-08 63.5 275 28.4
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 3.4e-08 63.5 316 29.1
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 7.5e-08 62.4 161 29.8
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 9.8e-08 62.0 273 27.5
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.3e-07 61.6 269 27.1
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 1.3e-07 61.6 215 27.4
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 2.2e-07 60.8 205 33.2
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 2.9e-07 60.5 207 32.9
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 2.9e-07 60.5 90 50.0
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 3.7e-07 60.1 325 27.4
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 4.9e-07 59.7 272 30.1
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 6.4e-07 59.3 195 29.7
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.1e-06 58.5 157 36.3
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.1e-06 58.5 203 31.0
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.1e-06 58.5 278 28.1
Cc10_g01650 Coffea canephora HOM05D007760 ORTHO05D008337 3.2e-06 57.0 343 29.4


User provided reference genes

Program Settings