Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 0.0e+00 1213.4 617 100.0
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 0.0e+00 1183.3 619 97.7
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 0.0e+00 1133.6 614 94.6
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 3.6e-277 958.0 618 80.9
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.6e-216 756.5 617 69.0
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 1.4e-212 743.4 630 68.3
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 3.0e-90 337.0 693 36.9
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.7e-82 311.2 692 35.3
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.4e-77 292.7 731 34.7
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 7.9e-75 285.8 704 33.8
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 7.9e-67 259.2 706 33.3
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.3e-66 258.5 683 33.5
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 2.5e-65 254.2 686 33.4
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 2.8e-64 250.8 686 32.8
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 3.7e-64 250.4 700 32.6
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 6.3e-64 249.6 707 32.8
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.7e-61 241.5 685 30.8
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.2e-60 237.3 649 31.9
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 1.2e-59 235.3 548 34.9
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 6.1e-59 233.0 685 29.6
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 1.8e-58 231.5 687 32.8
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 3.0e-58 230.7 658 32.1
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 8.7e-58 229.2 678 32.6
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.1e-57 228.8 702 31.2
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 2.2e-56 224.6 685 33.0
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 1.4e-55 221.9 695 30.1
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 3.4e-54 217.2 613 33.1
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.5e-54 216.9 572 32.5
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 1.4e-52 211.8 586 32.3
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 9.7e-49 199.1 604 32.3
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 9.7e-49 199.1 660 30.2
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 9.7e-49 199.1 676 28.7
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.3e-48 198.7 635 29.4
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 4.8e-48 196.8 679 29.9
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-47 195.7 408 36.5
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 9.1e-47 192.6 670 30.0
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.9e-44 184.9 672 29.3
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.5e-44 184.5 730 29.3
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 5.5e-44 183.3 672 28.6
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 3.6e-43 180.6 726 29.9
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 6.1e-43 179.9 519 33.7
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 2.6e-41 174.5 727 28.9
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 3.3e-41 174.1 684 29.2
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.7e-40 171.8 669 29.3
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.8e-39 168.3 747 27.4
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 2.4e-39 167.9 491 32.8
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.4e-39 167.9 685 29.5
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 9.1e-39 166.0 729 29.1
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.3e-37 162.2 649 29.0
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.3e-37 162.2 636 29.6
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.9e-37 161.0 768 27.9
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.6e-35 154.1 666 29.0
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.4e-34 152.1 631 28.1
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 1.4e-34 152.1 676 28.0
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.1e-33 149.1 587 30.0
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.1e-33 149.1 697 29.6
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 2.8e-32 144.4 686 29.2
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 4.8e-32 143.7 618 28.0
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.4e-31 142.1 683 26.5
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 3.1e-31 141.0 667 28.6
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 7.0e-31 139.8 635 29.1
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.6e-30 138.7 697 29.3
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 5.9e-30 136.7 689 28.2
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 5.9e-30 136.7 630 26.8
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.7e-29 135.2 714 26.2
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.2e-29 134.8 623 28.9
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 2.9e-29 134.4 645 27.9
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 6.5e-29 133.3 686 27.7
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 6.5e-29 133.3 656 27.6
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 2.5e-28 131.3 227 41.4
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 2.5e-28 131.3 598 28.4
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 6.1e-27 126.7 626 26.5
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 1.8e-26 125.2 618 25.7
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 3.0e-26 124.4 350 33.1
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 5.2e-26 123.6 550 28.4
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.2e-26 123.6 221 41.6
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.5e-25 122.1 610 28.7
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 5.7e-25 120.2 555 28.8
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 9.8e-25 119.4 667 27.3
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 9.8e-25 119.4 605 27.3
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 9.8e-25 119.4 618 26.2
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 2.2e-24 118.2 527 27.9
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.8e-24 117.9 665 27.1
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 2.8e-24 117.9 625 27.7
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 3.7e-24 117.5 649 27.1
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.4e-23 115.5 604 27.0
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.4e-23 114.8 682 27.6
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 5.4e-23 113.6 623 26.6
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 9.1e-23 112.8 233 37.8
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 5.9e-22 110.2 689 27.1
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 1.7e-21 108.6 134 47.8
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.8e-21 107.5 668 25.7
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 3.8e-21 107.5 277 32.5
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 1.2e-19 102.4 508 27.2
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 2.7e-19 101.3 631 26.3
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 2.7e-19 101.3 604 25.7
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 2.7e-19 101.3 572 28.1
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 6.1e-19 100.1 486 27.0
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 8.0e-19 99.8 528 27.3
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.4e-18 99.0 400 27.2
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 3.0e-18 97.8 484 26.9
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 2.0e-17 95.1 602 26.6
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 3.4e-17 94.4 417 27.1
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 2.2e-16 91.7 426 27.0
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 8.3e-16 89.7 326 29.8
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 4.1e-15 87.4 323 29.4
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 7.0e-15 86.7 120 41.7
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 1.2e-14 85.9 179 36.3
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 7.7e-14 83.2 416 26.9
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.1e-12 79.3 247 33.2
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 9.5e-12 76.3 433 25.9
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 8.0e-11 73.2 608 26.2
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 8.0e-11 73.2 512 24.4
BcaC03g15614 Brassica carinata HOM05D010473 ORTHO05D007577 5.7e-09 67.0 473 23.7
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 6.4e-08 63.5 107 38.3
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.4e-08 63.5 49 59.2
Lsat_1_v5_gn_2_9361 Lactuca sativa HOM05D037282 ORTHO05D035104 1.8e-07 62.0 124 37.9
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 5.9e-06 57.0 168 31.5
ECA238G3204 Erigeron canadensis HOM05D037282 ORTHO05D035104 5.9e-06 57.0 144 31.2


User provided reference genes

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