Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g081330.4 Solanum lycopersicum HOM05D007698 ORTHO05D009663 7.5e-138 493.8 244 100.0
Sopen04g034950 Solanum pennellii HOM05D007698 ORTHO05D009663 2.4e-115 419.1 211 98.1
PGSC0003DMG400003777 Solanum tuberosum HOM05D007698 ORTHO05D009663 1.5e-114 416.4 211 96.7
CAN.G311.17 Capsicum annuum HOM05D007698 ORTHO05D009663 3.5e-103 378.6 215 87.4
Nitab4.5_0008782g0040 Nicotiana tabacum HOM05D007698 ORTHO05D009663 5.5e-88 328.2 217 80.2
Peaxi162Scf00684g00033 Petunia axillaris HOM05D007698 ORTHO05D009663 2.7e-87 325.9 215 77.7
Nitab4.5_0010964g0010 Nicotiana tabacum HOM05D007698 ORTHO05D009663 8.7e-86 320.9 214 78.0
Atru.chr7.1161 Acer truncatum HOM05D007698 ORTHO05D009663 3.0e-78 295.8 213 70.0
Ciclev10009487m.g Citrus clementina HOM05D007698 ORTHO05D009663 8.8e-78 294.3 214 69.6
QL10p023449 Quercus lobata HOM05D007698 ORTHO05D009663 2.5e-77 292.7 213 70.4
Cc06_g08510 Coffea canephora HOM05D007698 ORTHO05D009663 7.4e-77 291.2 217 68.7
Manes.14G132100 Manihot esculenta HOM05D007698 ORTHO05D009663 9.7e-77 290.8 213 68.5
PGR142G3861 Punica granatum HOM05D007698 ORTHO05D009663 6.3e-76 288.1 212 68.9
Cpa.g.sc75.28 Carica papaya HOM05D007698 ORTHO05D009663 1.1e-75 287.3 213 67.1
HanXRQChr10g0315501 Helianthus annuus HOM05D007698 ORTHO05D009663 1.4e-75 287.0 228 67.5
Cfa003373 Carpinus fangiana HOM05D007698 ORTHO05D009663 3.1e-75 285.8 214 67.8
Oeu055888.1 Olea europaea HOM05D007698 ORTHO05D009663 4.1e-75 285.4 216 66.7
Rhsim03G0248000 Rhododendron simsii HOM05D007698 ORTHO05D009663 6.9e-75 284.6 214 68.7
Actinidia07425 Actinidia chinensis HOM05D007698 ORTHO05D009663 1.2e-74 283.9 213 67.6
Eucgr.C01174 Eucalyptus grandis HOM05D007698 ORTHO05D009663 1.5e-74 283.5 214 65.9
FAN23G0447 Fragaria x ananassa HOM05D007698 ORTHO05D009663 1.5e-74 283.5 212 70.3
MD02G1032500 Malus domestica HOM05D007698 ORTHO05D009663 2.6e-74 282.7 210 70.0
FAN28G0224 Fragaria x ananassa HOM05D007698 ORTHO05D009663 3.4e-74 282.3 212 69.8
FvH4_1g03270 Fragaria vesca HOM05D007698 ORTHO05D009663 7.7e-74 281.2 212 69.3
Gohir.A06G056000 Gossypium hirsutum HOM05D007698 ORTHO05D009663 7.7e-74 281.2 210 67.1
Nn2g12029 Nelumbo nucifera HOM05D007698 ORTHO05D009663 7.7e-74 281.2 213 66.7
RcHm_v2.0_Chr2g0088411 Rosa chinensis HOM05D007698 ORTHO05D009663 7.7e-74 281.2 212 69.3
TAR625G0118 Trochodendron aralioides HOM05D007698 ORTHO05D009663 1.3e-73 280.4 213 64.8
Thecc.09G126500 Theobroma cacao HOM05D007698 ORTHO05D009663 1.7e-73 280.0 210 67.1
MSTRG.19596 Avicennia marina HOM05D007698 ORTHO05D009663 6.5e-73 278.1 215 66.0
ECA234G1302 Erigeron canadensis HOM05D007698 ORTHO05D009663 1.1e-72 277.3 196 71.4
TWI63G1008 Tripterygium wilfordii HOM05D007698 ORTHO05D009663 1.1e-72 277.3 211 67.8
CiPaw.04G171100 Carya illinoinensis HOM05D007698 ORTHO05D009663 1.9e-72 276.6 214 66.8
GSVIVG01015531001 Vitis vinifera HOM05D007698 ORTHO05D009663 3.2e-72 275.8 215 66.0
Gorai.010G064000 Gossypium raimondii HOM05D007698 ORTHO05D009663 4.2e-72 275.4 210 65.7
CANSAT11G0563 Cannabis sativa HOM05D007698 ORTHO05D009663 1.6e-71 273.5 218 65.6
Potri.006G069900 Populus trichocarpa HOM05D007698 ORTHO05D009663 1.6e-71 273.5 207 68.1
CsaV3_2G002860 Cucumis sativus L. HOM05D007698 ORTHO05D009663 2.1e-71 273.1 191 68.1
ATR1120G147 Amborella trichopoda HOM05D007698 ORTHO05D009663 1.4e-70 270.4 153 79.1
MBI01_g36268_MAGBIO Magnolia biondii HOM05D007698 ORTHO05D009663 1.4e-70 270.4 184 71.7
Hund26504 Selenicereus undatus HOM05D007698 ORTHO05D009663 1.4e-70 270.4 201 66.7
Aqoxy7G02180 Aquilegia oxysepala HOM05D007698 ORTHO05D009663 1.8e-70 270.0 148 85.1
MELO3C004507.2 Cucumis melo HOM05D007698 ORTHO05D009663 1.8e-70 270.0 218 62.8
arahy.Tifrunner.gnm1.ann1.W83AFC Arachis hypogaea HOM05D007698 ORTHO05D009663 2.3e-70 269.6 231 62.8
Os05g0401200 Oryza sativa ssp. japonica HOM05D007698 ORTHO05D009663 3.9e-70 268.9 207 64.3
Prupe.7G243000 Prunus persica HOM05D007698 ORTHO05D009663 3.9e-70 268.9 214 67.3
CDE06G2164 Ceratophyllum demersum HOM05D007698 ORTHO05D009663 6.7e-70 268.1 220 65.5
PSO455G0268 Papaver somniferum HOM05D007698 ORTHO05D009663 6.7e-70 268.1 151 82.1
Sed0013311 Sechium edule HOM05D007698 ORTHO05D009663 6.7e-70 268.1 219 63.9
VMungo1215G1358 Vigna mungo HOM05D007698 ORTHO05D009663 8.8e-70 267.7 218 65.1
EL10Ac8g18655 Beta vulgaris HOM05D007698 ORTHO05D009663 1.1e-69 267.3 215 63.7
Phvul.003G164400 Phaseolus vulgaris HOM05D007698 ORTHO05D009663 3.3e-69 265.8 216 62.5
arahy.Tifrunner.gnm1.ann1.K2HWUU Arachis hypogaea HOM05D007698 ORTHO05D009663 4.4e-69 265.4 217 64.5
AUR62013358 Chenopodium quinoa HOM05D007698 ORTHO05D009663 4.4e-69 265.4 238 59.7
PSO170G4754 Papaver somniferum HOM05D007698 ORTHO05D009663 4.4e-69 265.4 151 81.5
TPR.G10704 Trifolium pratense HOM05D007698 ORTHO05D009663 4.4e-69 265.4 218 61.9
Lj4g0022576 Lotus japonicus HOM05D007698 ORTHO05D009663 9.7e-69 264.2 143 83.2
Lalb_Chr13g0301871 Lupinus albus HOM05D007698 ORTHO05D009663 1.3e-68 263.8 148 80.4
Psat4g040160 Pisum sativum HOM05D007698 ORTHO05D009663 1.3e-68 263.8 218 63.3
ClCG11G003040 Citrullus lanatus HOM05D007698 ORTHO05D009663 2.2e-68 263.1 232 59.1
Ca_21682_v3 Cicer arietinum L. HOM05D007698 ORTHO05D009663 2.8e-68 262.7 214 63.6
Medtr4g114410 Medicago truncatula HOM05D007698 ORTHO05D009663 4.8e-68 261.9 147 80.3
SEGI_02335 Sequoiadendron giganteum HOM05D007698 ORTHO05D009663 1.8e-67 260.0 212 62.3
Migut.D01902 Erythranthe guttata HOM05D007698 ORTHO05D009663 3.1e-67 259.2 213 62.4
SalBow5G0976 Salvia bowleyana HOM05D007698 ORTHO05D009663 5.3e-67 258.5 164 75.6
Pp3c7_12150 Physcomitrium patens HOM05D007698 ORTHO05D009663 7.0e-67 258.1 196 65.8
arahy.Tifrunner.gnm1.ann1.DB6URZ Arachis hypogaea HOM05D007698 ORTHO05D009663 2.0e-66 256.5 157 77.1
DCAR_020920 Daucus carota HOM05D007698 ORTHO05D009663 1.3e-65 253.8 194 68.0
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 2.9e-65 252.7 144 79.2
Mapoly0135s0019 Marchantia polymorpha HOM05D007698 ORTHO05D009663 5.0e-65 251.9 151 77.5
vmacro06130 Vaccinium macrocarpon HOM05D007698 ORTHO05D009663 1.6e-63 246.9 142 81.7
HPP92_024087 Vanilla planifolia HOM05D007698 ORTHO05D009663 2.7e-63 246.1 152 73.0
Haze_25578 Corylus avellana HOM05D007698 ORTHO05D009663 4.7e-63 245.4 192 65.6
Glyma.13G167300 Glycine max HOM05D007698 ORTHO05D009663 2.0e-61 240.0 216 58.8
FAN19G0166 Fragaria x ananassa HOM05D007698 ORTHO05D009663 7.4e-61 238.0 190 67.9
Hma1.2p1_2368F.1_g320690 Hydrangea macrophylla HOM05D007698 ORTHO05D009663 1.6e-58 230.3 213 59.6
Hma1.2p1_0018F.1_g012410 Hydrangea macrophylla HOM05D007698 ORTHO05D009663 1.0e-57 227.6 211 58.8
arahy.Tifrunner.gnm1.ann1.UUR3FU Arachis hypogaea HOM05D007698 ORTHO05D009663 3.6e-55 219.2 133 75.9
AUR62011129 Chenopodium quinoa HOM05D007698 ORTHO05D009663 2.3e-54 216.5 145 72.4
SalBow5G4762 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.2e-50 204.1 167 63.5
Gohir.D06G054575 Gossypium hirsutum HOM05D007698 ORTHO05D009663 3.5e-50 202.6 182 57.7
Cre07.g323600 Chlamydomonas reinhardtii HOM05D007698 ORTHO05D009663 1.3e-49 200.7 148 62.2
Glyma.17G114902 Glycine max HOM05D007698 ORTHO05D009663 1.8e-46 190.3 106 82.1
FAN26G2937 Fragaria x ananassa HOM05D007698 ORTHO05D009663 3.7e-36 156.0 159 57.9
Sc08g0006600 Simmondsia chinensis HOM05D007698 ORTHO05D009663 1.8e-35 153.7 153 55.6
SGA_v2.0_scaffold71G23757 Striga asiatica HOM05D007698 ORTHO05D009663 1.3e-33 147.5 158 56.3
Zm00001eb203770 Zea mays HOM05D007698 ORTHO05D009663 6.6e-33 145.2 96 71.9
Dinv36527 Davidia involucrata HOM05D007698 ORTHO05D009663 2.7e-26 123.2 133 57.9
MCO02G310 Micromonas commoda HOM05D007698 ORTHO05D009663 2.5e-24 116.7 151 44.4
unitig_749.g14098 Utricularia gibba HOM05D007698 ORTHO05D009663 8.9e-22 108.2 84 67.9
PRCOL_00004764 Prasinoderma coloniale HOM05D007698 ORTHO05D009663 2.1e-15 87.0 162 37.7
Hund09129 Selenicereus undatus HOM05D007698 ORTHO05D009663 2.7e-10 70.1 129 37.2


User provided reference genes

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