Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.1e-73 280.0 160 100.0
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 6.1e-72 274.2 160 98.8
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.2e-64 250.0 193 70.5
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.2e-59 233.4 160 87.5
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 2.8e-56 222.2 160 83.8
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.7e-53 213.0 159 78.6
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 7.1e-52 207.6 160 75.6
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 9.2e-52 207.2 160 76.9
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.0e-50 203.8 161 75.8
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 5.1e-50 201.4 166 72.3
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 6.6e-50 201.1 161 76.4
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.3e-49 198.7 160 73.8
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 3.3e-49 198.7 161 74.5
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 5.6e-49 198.0 160 76.2
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 5.6e-49 198.0 161 76.4
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 5.6e-49 198.0 159 74.8
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 7.3e-49 197.6 160 73.8
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 9.5e-49 197.2 160 76.2
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.6e-48 195.3 160 71.2
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 6.2e-48 194.5 160 74.4
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 1.8e-47 193.0 161 73.9
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.8e-47 193.0 160 73.1
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 4.0e-47 191.8 160 71.9
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.8e-47 191.0 160 71.9
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 6.8e-47 191.0 160 72.5
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 8.9e-47 190.7 160 71.2
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.5e-46 189.9 165 67.9
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 1.5e-46 189.9 162 72.8
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 2.0e-46 189.5 154 66.9
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 4.4e-46 188.3 160 71.2
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 5.8e-46 188.0 162 71.6
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 7.6e-46 187.6 161 72.7
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 7.6e-46 187.6 162 71.6
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 9.9e-46 187.2 169 71.6
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 9.9e-46 187.2 160 71.9
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 2.2e-45 186.0 155 74.8
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.9e-45 185.7 161 70.2
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 6.4e-45 184.5 154 74.0
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 6.4e-45 184.5 160 70.0
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 8.4e-45 184.1 155 72.9
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 1.4e-44 183.3 153 74.5
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 1.4e-44 183.3 161 70.2
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.4e-44 183.3 160 71.9
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.9e-44 183.0 162 72.2
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.9e-44 183.0 151 74.8
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 3.2e-44 182.2 162 71.6
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 3.2e-44 182.2 157 74.5
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.2e-43 180.3 160 73.8
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 4.6e-43 178.3 153 70.6
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 6.0e-43 177.9 165 68.5
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 6.0e-43 177.9 159 71.7
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 7.8e-43 177.6 153 72.5
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 1.3e-42 176.8 155 72.3
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 3.0e-42 175.6 154 69.5
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 3.0e-42 175.6 159 70.4
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 5.1e-42 174.9 150 70.7
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 5.1e-42 174.9 171 66.1
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 5.1e-42 174.9 153 69.3
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 8.7e-42 174.1 159 71.1
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 8.7e-42 174.1 159 71.1
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 8.7e-42 174.1 155 69.7
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.5e-41 173.3 152 71.1
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.5e-41 173.3 160 68.8
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.9e-41 172.9 159 69.8
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 1.9e-41 172.9 153 70.6
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.5e-41 172.6 159 69.2
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 4.3e-41 171.8 159 70.4
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 5.6e-41 171.4 161 68.3
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 9.6e-41 170.6 153 69.3
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.2e-40 170.2 160 70.0
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 2.8e-40 169.1 159 69.2
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 3.6e-40 168.7 160 70.0
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 6.2e-40 167.9 199 58.8
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 8.1e-40 167.5 159 68.6
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.8e-39 166.4 163 65.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 3.1e-39 165.6 200 59.0
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 5.3e-39 164.9 151 71.5
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 9.0e-39 164.1 161 65.2
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 1.5e-38 163.3 152 70.4
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 2.0e-38 162.9 152 70.4
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 2.0e-38 162.9 153 67.3
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 4.4e-38 161.8 152 69.7
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 9.9e-38 160.6 118 79.7
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.3e-37 160.2 145 71.0
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 2.9e-37 159.1 152 68.4
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 2.9e-37 159.1 152 69.7
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 8.4e-37 157.5 152 70.4
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 3.5e-35 152.1 159 66.7
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 6.0e-35 151.4 123 70.7
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 2.3e-34 149.4 152 59.9
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.3e-33 145.6 142 62.7
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 4.3e-33 145.2 121 72.7
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.8e-32 142.5 151 66.2
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.6e-32 142.1 185 44.9
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.1e-31 140.6 145 60.7
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 2.4e-31 139.4 173 50.3
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 7.1e-28 127.9 124 58.9
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 6.0e-27 124.8 103 65.0
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.3e-26 122.9 69 75.4
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.3e-26 122.9 110 66.4
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 9.6e-25 117.5 108 59.3
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 6.4e-21 104.8 100 59.0
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 1.6e-16 90.1 111 46.8
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.6e-16 90.1 103 52.4
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 1.2e-14 84.0 91 52.7
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.6e-11 73.6 60 60.0
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 6.1e-11 71.6 91 46.2
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 1.8e-10 70.1 101 42.6
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 2.4e-07 59.7 60 51.7


User provided reference genes

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