Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 3.6e-312 1073.5 533 100.0
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 6.0e-305 1050.0 534 97.6
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 2.3e-301 1038.1 534 96.4
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 3.6e-278 961.1 534 88.0
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 7.4e-263 910.2 535 82.1
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 1.4e-245 852.8 483 83.4
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 4.4e-199 698.4 537 64.6
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 8.9e-192 674.1 539 61.8
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 1.2e-191 673.7 537 61.6
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 7.5e-191 671.0 547 62.2
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.2e-188 663.7 596 58.2
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 5.0e-187 658.3 538 61.0
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 5.6e-186 654.8 536 59.5
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 6.2e-185 651.4 540 61.1
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 2.6e-183 646.0 537 58.1
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 6.4e-182 641.3 492 63.8
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 1.9e-181 639.8 540 59.1
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 7.0e-181 637.9 540 60.7
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 7.0e-181 637.9 540 59.3
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 9.2e-181 637.5 538 59.1
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 4.6e-180 635.2 540 58.7
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 6.0e-180 634.8 540 58.7
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.0e-179 634.0 540 59.3
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 1.3e-179 633.6 540 56.3
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 1.7e-179 633.3 542 55.9
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 3.9e-179 632.1 540 59.3
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 3.9e-179 632.1 542 55.5
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 8.6e-179 630.9 542 58.5
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.9e-178 629.8 540 58.1
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 9.5e-178 627.5 567 56.6
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 1.1e-176 624.0 562 56.8
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 1.4e-176 623.6 539 57.0
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 2.3e-176 622.9 530 59.6
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 4.4e-175 618.6 529 58.4
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 9.9e-175 617.5 538 57.6
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.3e-174 617.1 542 57.7
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.7e-174 616.7 541 58.2
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 3.7e-174 615.5 543 59.3
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.1e-173 614.0 540 58.1
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 2.4e-173 612.8 539 56.0
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.4e-173 612.8 537 56.4
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 3.2e-173 612.5 537 56.4
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.2e-172 610.5 541 55.6
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.5e-172 609.0 537 55.9
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 3.5e-172 609.0 541 56.7
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 3.5e-172 609.0 540 56.3
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 4.6e-172 608.6 543 55.8
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 1.7e-171 606.7 533 57.2
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 8.6e-171 604.4 540 54.8
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 3.3e-170 602.4 540 56.1
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 5.6e-170 601.7 540 55.2
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 9.5e-170 600.9 542 54.8
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.2e-169 600.5 540 55.6
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.6e-169 600.1 545 56.1
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 2.1e-169 599.7 540 56.1
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 4.7e-169 598.6 586 53.6
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 6.2e-169 598.2 542 56.5
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 8.1e-169 597.8 540 55.9
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 5.8e-167 591.7 537 55.3
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 2.9e-166 589.3 542 52.8
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 8.4e-166 587.8 542 53.7
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 1.1e-165 587.4 544 53.7
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.1e-165 587.4 539 55.5
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.4e-165 587.0 540 55.2
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.4e-165 587.0 540 56.5
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.4e-165 586.3 542 53.5
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 3.5e-164 582.4 542 53.5
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 3.5e-164 582.4 539 54.5
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 1.0e-163 580.9 542 53.1
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 1.3e-163 580.5 544 52.9
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.3e-163 580.5 537 52.3
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 3.0e-163 579.3 544 53.1
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 3.0e-163 579.3 542 53.1
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 6.6e-163 578.2 547 55.0
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.1e-162 577.4 540 55.4
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.2e-159 567.4 537 52.9
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 2.7e-156 556.2 467 59.7
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 6.0e-156 555.1 575 48.7
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 1.3e-155 553.9 539 50.1
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 6.6e-155 551.6 542 50.6
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.3e-154 549.3 630 47.3
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 4.8e-153 545.4 524 55.2
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 9.9e-151 537.7 542 49.8
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 9.9e-151 537.7 548 51.5
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 2.4e-149 533.1 548 51.1
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 4.2e-149 532.3 446 60.5
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.3e-147 527.3 457 54.5
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 4.3e-146 522.3 541 49.2
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.2e-140 504.2 427 59.5
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 3.3e-130 469.5 470 49.8
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 7.4e-130 468.4 539 48.4
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 1.3e-129 467.6 543 46.4
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.5e-127 460.7 557 46.3
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 1.3e-126 457.6 559 46.9
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 2.4e-120 436.8 467 49.7
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 2.0e-119 433.7 553 46.1
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 5.0e-118 429.1 557 44.9
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 6.1e-116 422.2 310 65.2
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 1.5e-106 391.0 482 44.8
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 2.9e-102 376.7 400 48.5
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 1.2e-90 338.2 558 35.7
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.2e-82 311.6 571 35.2
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.9e-78 297.0 561 34.2
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 9.5e-77 292.0 466 37.6
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.3e-75 287.3 575 36.2
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.0e-74 284.3 568 35.9
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 1.7e-73 281.2 218 62.8
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 7.1e-56 222.6 207 54.1
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 4.6e-55 219.9 256 46.5
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 3.8e-41 173.7 108 74.1
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 9.3e-40 169.1 173 52.6
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 9.6e-29 132.5 187 41.2
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.3e-28 132.1 76 82.9
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 8.4e-25 119.4 119 46.2
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 6.0e-23 113.2 124 47.6
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 3.8e-17 94.0 63 66.7
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 3.5e-15 87.4 119 43.7
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 2.9e-09 67.8 92 40.2
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 4.2e-08 63.9 36 77.8
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 2.1e-07 61.6 148 29.7
EL10Ac7g16823 Beta vulgaris HOM05D006431 ORTHO05D007918 6.1e-07 60.1 128 29.7


User provided reference genes

Program Settings